Gene Information

Name : c1184 (c1184)
Accession : NP_753103.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1142992 - 1143417 bp
Length : 426 bp
Strand : +
Note : Escherichia coli O157:H7 ortholog: z1634

DNA sequence : 
GTGCAAATAACCGAAGCGTTATTTTCAGAGCAGGGAGACATCCGGCGTTTTGTTCAGCAGGCGGTGGACCACTGGACGCA
TCTGCTGGCAGTCCACTTCACACTCCATTCGGCAGAAGGAAATATCAACGGGCAACAGATTCATGCATTCTGTACTTCCT
TTTATGAACGTATTACTGAGCGTAATCACACGACCAGTCCATCATCGCCGCTGGTATTACGCTGGTTGCGGGAACAACTA
CATGGAGGAGCAACAATACGATGCCTGTTGCTGCTCAGCCAGACGAGCATTTGCCATCCGCGAGCCAGTGTGACAGGTGA
TGAAGCATGTTCACAACTGGTGGATTTACTGCAACAGACCTGGCGGGTGATAAGTGCTGGCGGACAATGTCGGGTGGAAA
GTTTTTTTTCGGGTTGCCCGGCCTGA

Protein sequence : 
MQITEALFSEQGDIRRFVQQAVDHWTHLLAVHFTLHSAEGNINGQQIHAFCTSFYERITERNHTTSPSSPLVLRWLREQL
HGGATIRCLLLLSQTSICHPRASVTGDEACSQLVDLLQQTWRVISAGGQCRVESFFSGCPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42059.1 hypothetical protein Not tested PAI II 536 Protein 4e-48 82
z1194 AAT48702.1 hypothetical protein Not tested PAI II 4787 Protein 4e-38 78
Z1194 NP_286729.1 hypothetical protein Not tested TAI Protein 1e-43 77
Z1634 NP_287137.1 hypothetical protein Not tested TAI Protein 1e-43 77
z1194 CAC43420.1 hypothetical protein Not tested PAI III 536 Protein 2e-37 77
ECO111_3777 YP_003236112.1 hypothetical protein Not tested LEE Protein 1e-36 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c1184 NP_753103.1 hypothetical protein VFG1578 Protein 2e-48 82
c1184 NP_753103.1 hypothetical protein VFG1638 Protein 6e-38 77