Gene Information

Name : c1171 (c1171)
Accession : NP_753096.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1135368 - 1135961 bp
Length : 594 bp
Strand : +
Note : Escherichia coli O157:H7 ortholog: z1567

DNA sequence : 
ATGTATAATGCTAACCCCAATTACGAAATGAATTTCACGATTCTGAAAGATGTGAATGAACACATGGAAGGTCTGTTTCA
ACGTTTTTCTAAACTGTTACCTTTCAGAATTGATTTTGCCTACAGGAAAGACACGCCCAGTTTCGGGCATTCCTGTAAGC
ACAGTATGTGTATTGAAATATACCGTTTACTTAGCGAAACCCAGACGATGTTGGCAGGATATTACTGGGTAATGGAATAT
ACACCAGACAAAGGGCTTCATATTCATTTTATCGGCTATCTGGATGGGCAACGTCACAAGAACTCTTATCAGATATCCAG
GCAACTGGGGGATATCTGGAGGCGGATCACGGAAGGGGAGGGTTATTTTCACCTTTGCCGGGCTAAAGACAAATACCCGG
TGCGTATCGATCACGTGATTCACTATAGTGATAAATCTGCGGTAGACGACTTACGTTACGCCCTTAGCTACCTGGCTAAA
CAGGATCAGAAAGAACACGGTATTATTCTGAGGCGTAGCAGGCTTTCCGAAAAAAGCAACCGGGGCCGACCACGACTGAA
CAGTATCCTGCCAGGGATATGTTCTCAGCTGTAA

Protein sequence : 
MYNANPNYEMNFTILKDVNEHMEGLFQRFSKLLPFRIDFAYRKDTPSFGHSCKHSMCIEIYRLLSETQTMLAGYYWVMEY
TPDKGLHIHFIGYLDGQRHKNSYQISRQLGDIWRRITEGEGYFHLCRAKDKYPVRIDHVIHYSDKSAVDDLRYALSYLAK
QDQKEHGIILRRSRLSEKSNRGRPRLNSILPGICSQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1128 NP_286663.1 hypothetical protein Not tested TAI Protein 4e-83 95
Z1567 NP_287071.1 hypothetical protein Not tested TAI Protein 4e-83 95
unnamed AAL08430.1 unknown Not tested SRL Protein 6e-84 94
S3187 NP_838470.1 hypothetical protein Not tested SHI-1 Protein 6e-61 63
SF2982 NP_708756.1 hypothetical protein Not tested SHI-1 Protein 6e-61 63
unnamed CAE85184.1 hypothetical protein Not tested PAI V 536 Protein 2e-56 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c1171 NP_753096.1 hypothetical protein VFG1021 Protein 2e-84 94
c1171 NP_753096.1 hypothetical protein VFG0646 Protein 2e-61 63