Gene Information

Name : alpA (c1169)
Accession : NP_753094.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : prophage CP4-57 regulatory protein alpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1132071 - 1132319 bp
Length : 249 bp
Strand : +
Note : Escherichia coli K-12 ortholog: b2624; Escherichia coli O157:H7 ortholog: z1563

DNA sequence : 
ATGCCTGAACTGAGCCAATTGTTAGGTATATCTCGTTCGACAATTTACGAAAAAATGAATCCGTTATCGAAATACTACGA
TGCAACCTTCCCCAGGCCGGTACGTCTTGGTAGTGGTTCTGTGGGCTGGCGTTCATCAGCTATTGACGAATGGCTTACTT
TACATACTGTACCTGCCAGATCAGCAGTCAAAGGTGTTAATGACGAAGTGCGACATACGCTTTCTTCAGATATGACCATG
AGCAGATAA

Protein sequence : 
MPELSQLLGISRSTIYEKMNPLSKYYDATFPRPVRLGSGSVGWRSSAIDEWLTLHTVPARSAVKGVNDEVRHTLSSDMTM
SR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1563 NP_287067.1 prophage regulatory protein Not tested TAI Protein 1e-33 100
Z1124 NP_286659.1 prophage regulatory protein Not tested TAI Protein 1e-33 100
unnamed AAL08428.1 putative transcriptional regulator Not tested SRL Protein 6e-19 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alpA NP_753094.1 prophage CP4-57 regulatory protein alpA VFG1019 Protein 3e-19 66