Gene Information

Name : CE0948 (CE0948)
Accession : NP_737558.1
Strain : Corynebacterium efficiens YS-314
Genome accession: NC_004369
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1008595 - 1009296 bp
Length : 702 bp
Strand : +
Note : similar to AE006985-4|AAK45257.1| percent identity: 68 in 233 aa

DNA sequence : 
ATGAAAGTTCTGGTAGTAGATGATGAGCCGGCGGTACGCGAGTCTCTGAGACGTTCCCTGACCTTCAATGGATACAACGT
GGTGACTGCCGAAGATGGCGTGCAGGCACTGGAAGTTATTGAGAGGGAACATCCTGAAATCGTGATTCTTGATGTCATGA
TGCCGCGGATGGATGGCCTCGAGGTGTGCCGCACCCTCCGCAGCCAGGGCGATGACCGCTCCATTCTCATCCTCACTGCC
CGGGACAATGTCTCCGACCGCGTCGGTGGTCTGGACGCGGGAGCTGATGACTACCTGACCAAGCCTTTCGCGCTGGAGGA
GCTGCTCGCCCGGGTCCGGTCACTCGTGCGTCGCTCCGCGGTGGAATCCAATAACAATGCGGCCAGCAACCGACAGACTG
AACTCACCTTCGGGGATCTCACCCTGAACCCGGAGACCCGCGATGTATCCAGGGCGGTCCGTCCCATCAGTCTGACCCGC
ACCGAGTTCGCCCTCCTGGAACTCCTGATGAAAAACCCCCGGAAGGTGCTGCCCCGTAACACCATCCTGGAGGAGGTCTG
GGGCTATGACTTTCCCACCTCGGGCAATGCCCTCGAGGTGTATATCGGTTACCTGCGCCGCAAGACTGAGCAGGAGGGGG
AGAGCAGGGTCATCTACACCGTCCGTGGAGTCGGCTATGTCCTCAGGGAGACCGCTCCGTGA

Protein sequence : 
MKVLVVDDEPAVRESLRRSLTFNGYNVVTAEDGVQALEVIEREHPEIVILDVMMPRMDGLEVCRTLRSQGDDRSILILTA
RDNVSDRVGGLDAGADDYLTKPFALEELLARVRSLVRRSAVESNNNAASNRQTELTFGDLTLNPETRDVSRAVRPISLTR
TEFALLELLMKNPRKVLPRNTILEEVWGYDFPTSGNALEVYIGYLRRKTEQEGESRVIYTVRGVGYVLRETAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-32 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE0948 NP_737558.1 two-component system response regulator BAC0125 Protein 5e-32 43
CE0948 NP_737558.1 two-component system response regulator HE999704.1.gene1528. Protein 2e-34 43
CE0948 NP_737558.1 two-component system response regulator BAC0197 Protein 2e-29 43
CE0948 NP_737558.1 two-component system response regulator NC_012469.1.7685629. Protein 2e-29 41
CE0948 NP_737558.1 two-component system response regulator BAC0083 Protein 1e-31 41
CE0948 NP_737558.1 two-component system response regulator AE016830.1.gene1681. Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE0948 NP_737558.1 two-component system response regulator VFG1390 Protein 1e-68 69
CE0948 NP_737558.1 two-component system response regulator VFG1386 Protein 2e-42 47
CE0948 NP_737558.1 two-component system response regulator VFG0596 Protein 3e-32 43