Gene Information

Name : CE0233 (CE0233)
Accession : NP_736843.1
Strain : Corynebacterium efficiens YS-314
Genome accession: NC_004369
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 256262 - 256936 bp
Length : 675 bp
Strand : -
Note : similar to Z99494-27|CAB16701.1| percent identity: 40 in 223 aa

DNA sequence : 
ATGGCCACGGAACGGATTCTCATCGCGGAGGATGATGATGGCATTGCGGATTTCATCAGGCGCGGCCTGGTACAGGAGGG
TTTCGAGTGCGAGGTGGCGGTATCCGGCGCGGCCGCTTTTGCACGTGCCCACAGTGGTGATTTTGATCTGATGATCCTGG
ATCTGGGGCTGCCGCATATGGATGGTGCGGATGTTCTGGAGCAGCTGCGTGTGTTGAAGGTGTCGCTACCGATCATTGTA
CTCACCGCCCGGACGAACATTGAAGATCGCATCCGGTCCCTGGAGGGCGGGGCGGATGATTATATGCCCAAGCCCTTCCA
GTTTGCGGAGCTCCTGGCGCGGGTAAAGTTGCGTCTGGCCAGCCGTCAGCCGGTGGAGAGGACCACGAATACGCACCTGC
TCAAGCACGGCACTCTGGAACTGGATCTACGCACCCAGAAGGTGTTTGTGGCAGATAAGTGGCGTGATCTTTCCCGCCGT
GAGTTCGACCTGCTGGAGACGCTCATGCGTCATCCGGGTCAGATTCTCTCCCGTGCCCAGTTGTTGAACATGGTGTGGGA
TATGAGCTTTGATCCGGGGTCCAATGTGGTGGATGTGTATATCCGTGCGCTGCGTAAGAAGATCGGCACGGAGAAGGTGG
AGACCATCCGGGGTTCTGGATACCGACTCGTTTAG

Protein sequence : 
MATERILIAEDDDGIADFIRRGLVQEGFECEVAVSGAAAFARAHSGDFDLMILDLGLPHMDGADVLEQLRVLKVSLPIIV
LTARTNIEDRIRSLEGGADDYMPKPFQFAELLARVKLRLASRQPVERTTNTHLLKHGTLELDLRTQKVFVADKWRDLSRR
EFDLLETLMRHPGQILSRAQLLNMVWDMSFDPGSNVVDVYIRALRKKIGTEKVETIRGSGYRLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-30 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE0233 NP_736843.1 transcriptional regulator BAC0197 Protein 7e-32 43
CE0233 NP_736843.1 transcriptional regulator BAC0638 Protein 9e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE0233 NP_736843.1 transcriptional regulator VFG0596 Protein 1e-30 43
CE0233 NP_736843.1 transcriptional regulator VFG1389 Protein 2e-32 43