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Name : CE0223 (CE0223) Accession : NP_736833.2 Strain : Corynebacterium efficiens YS-314 Genome accession: NC_004369 Putative virulence/resistance : Unknown Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 245276 - 245836 bp Length : 561 bp Strand : - Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : GTGAAGTCCCCCGAGCGTAACGACGCCCACGTCACGGAGCTGGCCCTTGCCGCCGGACGTGGAGACCGTGACGCCCTCAC CGAATTCATCCGCGAAACCCAGGATGATGTGTGGCGCCTGCTGGCCCACCTCGGTGGCCGGGAGATCGCCGATGATCTGA CCCAGGAGACCTACCTCCGCGTCATGAGCGCACTCCCCCGCTTCGCGGCCCGCTCCTCCGCCCGCACCTGGCTGCTCTCC CTCGCCCGGCGCGTCTGGGTGGACAACATCCGACACGACATGGCCCGCCCCCGCAAATCTCACGTCGAATACGAGGACAC CGGAGTCACCGACGCCACCAACTCCACCATCTGGTCCGAGTGGATCGATGTGCGCACGCTTATCGACGCACTACCCGCCG AACGTCGCGAGGCACTGATCCTCACCCAGGTTCTCGGCTACACCTACGAGGAGGCGGCCAAGATCGCCGGCGTGCGGGTG GGAACAATCCGGTCGCGTGTCGCCCGCGCCCGGGCTGATCTCATCAACGCCACCTCCGCCCCGGAGGCGTACGGGACGTA G Protein sequence : MKSPERNDAHVTELALAAGRGDRDALTEFIRETQDDVWRLLAHLGGREIADDLTQETYLRVMSALPRFAARSSARTWLLS LARRVWVDNIRHDMARPRKSHVEYEDTGVTDATNSTIWSEWIDVRTLIDALPAERREALILTQVLGYTYEEAAKIAGVRV GTIRSRVARARADLINATSAPEAYGT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 7e-60 | 81 |
