Gene Information

Name : CE1223 (CE1223)
Accession : NP_737833.1
Strain : Corynebacterium efficiens YS-314
Genome accession: NC_004369
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1286269 - 1286874 bp
Length : 606 bp
Strand : -
Note : similar to L09108-2|AAA25862.1| percent identity: 45 in 187 aa

DNA sequence :
GTGGCCAGTCCACTTTGGGGTCATTTCGGATGGCTCCGATCCCGTACTCCCATTATCAGCGTCCACTTTCCGGGGGTCGG
GCCCGTGGATGCACCGAACAAGCTGTGGGTCGCGGACATTACCTATATCTCAACCTCGCAGGGCTGGGTATATGCCGCTT
TTGTGTTGGACGCCTTTTCACGAGAGATCGTCGGTTGGCAGATCACCAATCACATGCGGGCATCCTTGGCTAGGGATGCA
CTCGATATGGGGTTATCTGCCCGTCTTCGCGCTGGTGAGGACGTTTCCGGGTTGATTCATCACTCGGATCGTGGAGTGCA
ATACCGCAGCATTGTCTACGGTGAAACCCTGGCAGAATCTGACGTCGTTGCTTCGGTTGGATCACGTGGTGATTCCTACG
ATAATGCCATGGCAGAGGCGTTGAACTCAGTGTTCAAAGCTGAGCTTATTGATCGGCAGATCTGGCCGTCCTTAACGGAT
GTGCTCGTGGAATCCTCAAGGTGGATCGGGTGGTACAACAGTCGCCGGCTGCACTCGTCTGTGGATTACCGACCGCCGCG
GGAGGTACACCAGGACTGGACGAAACGTCAGGCTCAAGCGGCCTGA

Protein sequence :
MASPLWGHFGWLRSRTPIISVHFPGVGPVDAPNKLWVADITYISTSQGWVYAAFVLDAFSREIVGWQITNHMRASLARDA
LDMGLSARLRAGEDVSGLIHHSDRGVQYRSIVYGETLAESDVVASVGSRGDSYDNAMAEALNSVFKAELIDRQIWPSLTD
VLVESSRWIGWYNSRRLHSSVDYRPPREVHQDWTKRQAQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 5e-30 47
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 6e-31 47
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 3e-30 45
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-30 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE1223 NP_737833.1 transposase VFG1715 Protein 2e-30 47