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Name : gbs0190 (gbs0190) Accession : NP_734660.1 Strain : Streptococcus agalactiae NEM316 Genome accession: NC_004368 Putative virulence/resistance : Unknown Product : alpha amylase family protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 212316 - 213941 bp Length : 1626 bp Strand : + Note : similar to trehalose-6-phosphate hydrolase DNA sequence : ATGACGATTGATAAACGTAAAGTTGTCTATCAAATTTATCCAAAATCATACAAAGACACAACTGGTAATGGGGTTGGTGA TCTTCGTGGTATTATCGAAAAATTACCCTATTTAGCAGAACTTGGTATTGATATGGTTTGGCTCAACCCATTTTATCCGA GTCCACAACGAGATAATGGATATGATATCTCTGATTATACAGCCATTAACCCTGATTTTGGAAAGATGGACGATTTTGAA GAAATGATTGAGGTGGGACGTCAATACCGTATAGATTTTATGCTTGATATGGTGCTTAATCATTGTTCAATAGAACATGA GTGGTTTAAAAAAGCACTTGCAGGAGATCGCTACTATCAAGATTTCTTTATCTTACGTGATAATCCAACAGATTGGGTAT CTAAATTTGGTGGAAATGCTTGGTCACCATTTGGTGATACAGGGAAGTATTATCTTCATCTTTTTGATATCACTCAAGCT GACCTTAATTGGCGCAATGCCGATGTTCGCAAGGAACTTTTTAAAGTTGTCAATTTTTGGCGTGATAAAGGGGTTAAAGG TTTTCGATTTGATGTGATTAATTTAATTGGGAAAGATGAGATACTTGAGAACTGCCCAATTAATGATGGAAAACCAGCTT ATACTGATCGTCCAATAACACATGATTATCTCAAGATGTTGAATAATGCTAGTTTTGGACAAGCTGATTCCTTCATGACA GTTGGTGAAATGTCTTCAACGACAATTGCAAATTGCATTCTTTACACTGCACCAGAACGTGAAGAGTTATCCATGGCTTT TAATTTTCACCACCTCAAAGTAGATTATAAAGATGGGCAAAAGTGGACCATTATGGCTTTTGATTTTCCTGCATTACGTG ACCTTTTCCATAGTTGGGGCGAAGGAATGAGCGAAGGAAATGGTTGGAATGCTTTATTCTATAATAATCATGACCAACCG CGAGCATTAAATCGTTTTGTAGACGTGAAACGTTTTCGAAATGAAGGAGCAACCATGTTAGCAGCATCTATCCACTTATC GCGTGGTACTCCTTATATATATATGGGTGAAGAAATCGGAATGCTTGATCCCGATTACAGTTCTATGGATGATTATGTGG ATATTGAGAGTTTGAATGCCTACCAAATAATGCTTGATGAAGGCAAGTCACAAGAAGAGGCATTTAGCATTATTCGAGCG AAATCTCGAGACAATTCTCGAGTACCAATGCAATGGGATGATAGTACGAATGCAGGTTTTTCTGAAGGCGCTCCATGGTT GAAAGTAGGAAAATCATATAAAGAAATCAATGTCGCAAAGGAGAAAACAGGGCTGATATTTACTTTCTATCAAGAGTTGA TAAGGCTACGTAAACAACTGCCAATAATAGCTGACGGGAATTATAAAGCAGCTTTCAAAGATAACGAAAAAGTATATGCT TTTGAACGCCATCTTGATAAGCAAAAACTTCTTGTTTTAAATAATTTCTTTGCTGAGAAAGTTAAGATAAAATTACCGGA GAATTATCTCCAAGGACAAGTTCTTCTATCAAATTATAAGGATGTTACTCTTGATGAAACGGTTACTTTGCAACCTTATC AAACTTTAGCTATCTTAGTGTCATAA Protein sequence : MTIDKRKVVYQIYPKSYKDTTGNGVGDLRGIIEKLPYLAELGIDMVWLNPFYPSPQRDNGYDISDYTAINPDFGKMDDFE EMIEVGRQYRIDFMLDMVLNHCSIEHEWFKKALAGDRYYQDFFILRDNPTDWVSKFGGNAWSPFGDTGKYYLHLFDITQA DLNWRNADVRKELFKVVNFWRDKGVKGFRFDVINLIGKDEILENCPINDGKPAYTDRPITHDYLKMLNNASFGQADSFMT VGEMSSTTIANCILYTAPEREELSMAFNFHHLKVDYKDGQKWTIMAFDFPALRDLFHSWGEGMSEGNGWNALFYNNHDQP RALNRFVDVKRFRNEGATMLAASIHLSRGTPYIYMGEEIGMLDPDYSSMDDYVDIESLNAYQIMLDEGKSQEEAFSIIRA KSRDNSRVPMQWDDSTNAGFSEGAPWLKVGKSYKEINVAKEKTGLIFTFYQELIRLRKQLPIIADGNYKAAFKDNEKVYA FERHLDKQKLLVLNNFFAEKVKIKLPENYLQGQVLLSNYKDVTLDETVTLQPYQTLAILVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-107 | 43 |
