|
Name : gbs2088 (gbs2088) Accession : NP_736518.1 Strain : Streptococcus agalactiae NEM316 Genome accession: NC_004368 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 2160249 - 2160971 bp Length : 723 bp Strand : + Note : Similar to osmoprotectant ABC transporter (ATP-binding protein) DNA sequence : ATGATTTCATTTGAAAATGTTAGTAAATCATATGGTGATCATACCATCATTGATAATATTAGTTGCCATATTCAAAGAGG AGAATTCTTTGTCCTTGTGGGGGCCAGTGGCAGTGGTAAAACTACCATCCTCAAGATGATTAATCGTCTCATCGAACCAA GCCAAGGCGCTATTACTTTAGATGGGGAAAACATTACATCACTTGATTTGCGACAATTACGCTTAGAAACTGGTTATGTC TTGCAACAAATTGCACTTTTCCCCAATTTAACAGTTGGAGAAAATATAGAACTTATCCCTGAAATGAAGGGCTGGTCAAA AGGTGACCAAAAAAAAGCCGCTAGCGACCTTCTTGATAAGGTGGGTTTACCTGCTAAGGACTACTTTAATCGCTATCCTC ATGAGCTCTCTGGTGGGGAACAACAACGCATAGGTATCCTACGAGCAATCGTTGCTAAACCTAAGGTACTACTTATGGAT GAGCCATTTTCTGCTTTAGACCCTATCTCAAGACGTCAATTACAAGATATCACCAAACAATTACAGTCTGAATTGGGTAT TACATTAGTGTTTGTCACCCATGACATGAAGGAAGCTATGCGTCTTGCAGATAGAATTTGTGTTATTAAGGAAGGTAAGA TAGTGCAATTGGATAGACCAGAAATAATTCAAAATAATCCCTCTGACCAATTTGTTAGAACCCTATTTGAAGAGGAGAAC TGA Protein sequence : MISFENVSKSYGDHTIIDNISCHIQRGEFFVLVGASGSGKTTILKMINRLIEPSQGAITLDGENITSLDLRQLRLETGYV LQQIALFPNLTVGENIELIPEMKGWSKGDQKKAASDLLDKVGLPAKDYFNRYPHELSGGEQQRIGILRAIVAKPKVLLMD EPFSALDPISRRQLQDITKQLQSELGITLVFVTHDMKEAMRLADRICVIKEGKIVQLDRPEIIQNNPSDQFVRTLFEEEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-43 | 45 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-43 | 45 |
