|
Name : gbs1359 (gbs1359) Accession : NP_735796.1 Strain : Streptococcus agalactiae NEM316 Genome accession: NC_004368 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG3942 EC number : - Position : 1410217 - 1413012 bp Length : 2796 bp Strand : - Note : similar to plasmid and conjugative transposon protein DNA sequence : ATGAGAAAGGATAAGAGAATTGTGAAGGAAGCTCGGAAAACTTTTCGGAGTCATCTAAAAGAAAATCGAATCCATTATCG TCAAGAGAAAAAGAAGCTACAAGAAGCTTTGCCTAAACAACGCTTTATCATGAGTGAGTCTGAAAAAAAGGAACGAGAGG AACAGAAAAAGGTGCTGAAGCAGGCCTTTAGAGAAGGAAAAACAGCTGCACAAGCAACCTTTACGGAGGAAATTACTTAT GTATCTCCAAGGTTTTTAAAATCAAAAGAGATAAAGAAGTACCGTCTCCCTCAGACGAGAAACCGTCTAAAAGCAGCACG AAAGCGTTTGGAAGAGATTCAATTAGAAGAAAAATCGAATCCTAAGTTCGCCTACCACAAAGAAGCTGATATAAAATACC ATTCGCCTTTTCATTTCCATAAAGAAAAAACGTTGGAGAGACTACAGGCTGAAAAAGAAGTGAATTCAGCTAAATGTGAA TACAAATATCTCAAGCAAGCACACAAACAAAAGAAACTCTCCACAAAAATCAATCGCAGATTCCGTTTTCTTGCTTCTGA ATCCCTTGACCTTGTTTCGCAAGATGATGATTTAGAAGGAATAAGAACGATTCAGGATACAGCTCAAAAGGGCAAGCGTT ATGCCCGATTCACTTATCAATCGGCTCAGGCAATGATCAAAGGCGGACAAGCTGGCGCTCGCTTCACCCGAAAGAAAATT GCTCATGGAAAGGAGCGCTATCTCAATTTCAAAAAAGGAAATGGCTGGAAACGCAACAAGCCGACAAAGCCCAGACGACG CTACCAAACCTTTTTAAAACAAGCCGGAAAACAAAGTCTTGCCAGTGTAAAAAGTCTCTTTCAAGCCTTGAAAGGCAGTC TGACTTTCTTTTTAGTTCTTGCCGCAAATCCCATCACCTGGATTGTGTCTGGCCTACTTTTGATCTTTGTCATCATGATG AGCTTTGTCATGAGTATCTCAGGAGCTAGTATCATCCAGCAAGATGAGTTTGAGTTAACCAAGAGTTACACCCACATGAC TTGGGAAGACGCAGAACACACCAGAAGCAATGAGAAGGGCATTACCTACTACACTAAGATAGATGATGTCATGACTTTTA TGAATTACCAATATCAAGATTATGCCTTAGATGCTGTCATGGAAAATGGCAGAATGACTTATAAAGGTTATCTTAGTCAG CTTTGGGAGGATTTAAATGGCAGCTCATCCATCAAGTCCATGTCAGACTTAACTAAGAATCCCCCTTATAAACTCTCTGA TGAGGACCAAGAGGAACTAAAGGAATTAACAGAAGAAGGAAATTATCTAGCTCTCCAAGAATTGGATAATCCTTTTCAAG GGCAGACAGAAGAGAATGCTTTAACGATGTCCTACCGTTATGGCTATGATGTCATAGACGAGCAACCAACTCTTCATCAT CACATTATCTTAGAAGCAAAAGAGGGACAGGTGATTGTTGCACCGATGGATGGGAAGGTTTCACTTGACGGTGAGAATGT CATTCTCACATCAGGGAAAGGCCTAAATAAAAGCAAACTCACCCTCTTTCATATTGCGATAGGTCGCGTAAAAGAAGGGC AAAAGGTCTTAGCAGGAGACATCGTTGGCCAAGCCAAGGACGGTTCAGGGCTCAAAGTCACTTATCAAAAGGTGGACGAT GATACGGAGAAGTTGATTTATGTTAATCCAGCCTTTTACTTTCCAAAGGTAATTCAACTTCAGACCACTATTTTACCAGC TATTGGTCAGTTTGGTGGAGACGAGTTTGCGAGAGCCAAAGCGATCTATGAATACCTGAAAAGCCAAGGAGTGACCAATC AGGCGATTGCGGCGATTTTAGGGAACTGGTCAGTTGAGTCGTCTATCAATCCCAAGCGAGCTGAAGGAGATTATTTAGCA CCGCCTGTTGGGGCAACAGAACATTCTTGGGATGATGAAAATTGGTTATCTCTCAACGGCCCAGCTATTTATAATGGCCG CTATCCCAATATTTTAAAACGGGGCTTAGGGTTAGGCCAATGGACCGATACAGCTGATGGATCAAGGCGGCACACCCTTC TTTTGGAATACGCCAAAAGAAAGAAGCAGAAGTGGTATGATTTAGGCTTGCAGCTAGACTTTATGTTACACGGAGACAGC CCTTATTATACTAATTGGTTAAAAGGATTCTTTCAAAATATAGGAAGCCCAGCGAGTCTTGCTCAAGTCTTTCTGATTTC ATGGGAAGGTAACTCAGGAGATAAACTGTTAGAGCGTCAGACCAAGGCTACTGAGTGGTTCTATCAGATTGAAAAAGGCT TTAGTCAAGCAAATGGTGGAACAGCTCAAAGCGATCCGAAGGCTCTTGAAGCTGTCAGAGGTGACCTTTATGAGAACTCG GTACCAGGTGGCGGAGATGGCATGGGCTATGCCTATGGTCAATGTACTTGGGGAGTGGCTGCACGCCTGAACCAGCTGGG CTTAAAACTCAAAGGTCGAAATGGAGAGAAAATCTCCATTATCAATACGATGGGTAACGGTCAAGATTGGGTACGAACGG CCGCAAGCCTCGGCGGTGAAACAGGCTCAACGCCAAAAGCAGGTGCTATCGTCTCCTTTGTGGGTGGTGGACATGGCTCA CCAGCGGAATACGGACATGTGGCGTTTCTTGAGAAAGTTTATCCAGATGGGTCATTTCTTATCTCAGAAACCAATTACAA TGGCAATCCCAACTACACCTTCCGTAAAATTTCAGGAGTGGATAGCACGATTAGTTTTGCTTATACGACAAAATAA Protein sequence : MRKDKRIVKEARKTFRSHLKENRIHYRQEKKKLQEALPKQRFIMSESEKKEREEQKKVLKQAFREGKTAAQATFTEEITY VSPRFLKSKEIKKYRLPQTRNRLKAARKRLEEIQLEEKSNPKFAYHKEADIKYHSPFHFHKEKTLERLQAEKEVNSAKCE YKYLKQAHKQKKLSTKINRRFRFLASESLDLVSQDDDLEGIRTIQDTAQKGKRYARFTYQSAQAMIKGGQAGARFTRKKI AHGKERYLNFKKGNGWKRNKPTKPRRRYQTFLKQAGKQSLASVKSLFQALKGSLTFFLVLAANPITWIVSGLLLIFVIMM SFVMSISGASIIQQDEFELTKSYTHMTWEDAEHTRSNEKGITYYTKIDDVMTFMNYQYQDYALDAVMENGRMTYKGYLSQ LWEDLNGSSSIKSMSDLTKNPPYKLSDEDQEELKELTEEGNYLALQELDNPFQGQTEENALTMSYRYGYDVIDEQPTLHH HIILEAKEGQVIVAPMDGKVSLDGENVILTSGKGLNKSKLTLFHIAIGRVKEGQKVLAGDIVGQAKDGSGLKVTYQKVDD DTEKLIYVNPAFYFPKVIQLQTTILPAIGQFGGDEFARAKAIYEYLKSQGVTNQAIAAILGNWSVESSINPKRAEGDYLA PPVGATEHSWDDENWLSLNGPAIYNGRYPNILKRGLGLGQWTDTADGSRRHTLLLEYAKRKKQKWYDLGLQLDFMLHGDS PYYTNWLKGFFQNIGSPASLAQVFLISWEGNSGDKLLERQTKATEWFYQIEKGFSQANGGTAQSDPKALEAVRGDLYENS VPGGGDGMGYAYGQCTWGVAARLNQLGLKLKGRNGEKISIINTMGNGQDWVRTAASLGGETGSTPKAGAIVSFVGGGHGS PAEYGHVAFLEKVYPDGSFLISETNYNGNPNYTFRKISGVDSTISFAYTTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0968 | YP_001198334.1 | Tn5252, Orf28 | Not tested | 89K | Protein | 0.0 | 74 |
| SSU98_0981 | YP_001200539.1 | Tn5252, Orf28 | Not tested | 89K | Protein | 0.0 | 74 |
| Spaf_1124 | YP_006309926.1 | putative conjugal transfer protein | Not tested | FWisland_1 | Protein | 0.0 | 62 |
