Gene Information

Name : SO_A0136 (SO_A0136)
Accession : NP_720453.2
Strain :
Genome accession: NC_004349
Putative virulence/resistance : Unknown
Product : ISSod3, transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 120598 - 121812 bp
Length : 1215 bp
Strand : -
Note : similar to GP:5706382; identified by sequence similarity; putative

DNA sequence :
GTGCAAGTGTTAACTATCTTACATCAATCTCTCTATCAACATTGTCCAGAAATCCATCAAAAGCGACTGAATACACTCAT
GGTCGCCTGCAAAGCCCTCATCAACGCGGATTGTCTCACCCTCACGCATTTAGGGCGGCACATTGATGGCACCAGCACTC
ATACTAAACACTCAATAAAACGCATGGATAGATTATTGGGCAACCCGCACCTTCACCATGAAAGACTGGCTGTTTATCAG
TGGCATGCAAAGTGGCTGCTAACAGCACATACGATGCCGACCATACTGGTGGATTGGTCTGATATGCGTGAAGGTCGTGA
ACTGATTGCACTACGCGCCTCTATTGCGATTAAGGGCCGCTCTATCACGCTCTACGAGCGAACATTTCCGTTAGTACTAC
AAGGCACACAAACTGCCCATAATCAGTTTCTGAATGAACTCCATAAAGTGTTACCTGACAATATTACCCCGCTGATAGTC
ACTGACGCGGGCTTCCGTAATCCATGGTTTCGAAAAGTCGAGCAGCTCGGTTGGTATTGGCTGGGTCGTGTCAGAGGATT
AAGTGTCTATCGGCTGCACCCCTTCGGTCGCCAATTTTCGCTAAAAGCGCTTTATCCCAAAGCCAGTCGTCGCGCAAAAC
ATGTTGGGCGAGTGGCGTTATCGGTAAAGAAACCCTTGTTATGCGAGATGGTATTGTTCAGGGCTCCAAGTAAAGGCAGA
AAAGGTCAGCGAAGTACGACAACAGACTGTCACCATACGGCGCAATGGACGTATGAACTGACCGCCAAAGAGCCTTGGGC
ACTGGTGACCAACTTGACCATAGAAGCCATGTCGCCTCAAAAACTGGTTAATATTTACCAAAAACGGATGCAAATAGAAG
AAACCTTTAGAGATTTAAAAAGCCCCGCTTATGGCTTTGGTTTACGTCATAGCAGAACACGTTATGCGGCGAGGATGGAC
ATACTGCTATTGATAGCATTATTGGTACAACTGGCATTTTGGTGGGTAGGATTATACGGAGAAACACAGCAATTACAGCG
GCACTTCCAAGCCAACACGGTAAAGAAAAGGAATGTGCTATCAACAATCAGGATGGGCAAAGAACTGCTGCGGCGACGGC
ATGACTACCCCATATCAGCAGATGATTTGCTTTGTGCTGCGAAGAAACTAGCCCAACTCTCATTAACTCATGGTTGTTGG
GGCTATGAATTATGA

Protein sequence :
MQVLTILHQSLYQHCPEIHQKRLNTLMVACKALINADCLTLTHLGRHIDGTSTHTKHSIKRMDRLLGNPHLHHERLAVYQ
WHAKWLLTAHTMPTILVDWSDMREGRELIALRASIAIKGRSITLYERTFPLVLQGTQTAHNQFLNELHKVLPDNITPLIV
TDAGFRNPWFRKVEQLGWYWLGRVRGLSVYRLHPFGRQFSLKALYPKASRRAKHVGRVALSVKKPLLCEMVLFRAPSKGR
KGQRSTTTDCHHTAQWTYELTAKEPWALVTNLTIEAMSPQKLVNIYQKRMQIEETFRDLKSPAYGFGLRHSRTRYAARMD
ILLLIALLVQLAFWWVGLYGETQQLQRHFQANTVKKRNVLSTIRMGKELLRRRHDYPISADDLLCAAKKLAQLSLTHGCW
GYEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2983 NP_708757.1 iso-IS10R ORF Not tested SHI-1 Protein 3e-96 56
tnp AEA34674.1 IS10 transposase Not tested Not named Protein 6e-96 56
tnp AEA34664.1 IS10 transposase Not tested Not named Protein 6e-96 56
IS10 CAI43894.1 transposase for IS10 Not tested LEE Protein 3e-96 56
IS1999 CAJ77042.1 Insertion sequence Not tested AbaR1 Protein 2e-93 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SO_A0136 NP_720453.2 ISSod3, transposase VFG0647 Protein 1e-96 56