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Name : lysS (SO_0992) Accession : NP_716620.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase LysS Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1025577 - 1027079 bp Length : 1503 bp Strand : + Note : - DNA sequence : ATGACTGAACAAGTACAAGATGAAAACAAACTGATTGCCGAGCGTCGTGCCAAGCTAGACAGCATTCGCCCGAACTGCAG CGCGAATGCTCACCCTAATACGTTCCGTCGCACCCATAAAGCGGCAGAGTTGCAGGAAAAATACGGTCAAAATACTAAGG AAGAACTCGAAGCCTTAGGTTTTAGAACCAGCATCGCTGGCCGTATCATGGCAAAACGTGGCCCATTCCTAGTGATCCAA GACGTGTCTGGTCGTATCCAAGCTTACGCTGAAAAGGGCGTTCAAGCGGATCTGAAAGATCGTTACCAAGGTTTGGATAT CGGTGACATCATCGGCGTGACTGGTCAGTTGCACTTGTCTGGTAAAGGCGATCTGTACGTCAACATGGAAGAGTACCAAC TGCTGACTAAAGCACTACGTCCTCTGCCAGAAAAATTCCACGGCTTAACAGATCAAGAAACCCGTTACCGCCAACGTTAT GTTGACTTAATCGTTAACGAAGAATCTCGTCAAGCCTTCGTAATGCGTTCAAAAGTGGTTGCAGCTATCCGTAACTTCAT GATCAAAAAAGAGTTCATGGAAGTTGAAACCCCAATGATGCACGTGATCCCAGGCGGCGCTTCTGCCCGTCCATTTATCA CGCACCACAATGCGCTGGACATGCCTATGTACCTGCGTATCGCGCCAGAGTTATACCTCAAGCGTTTAGTGGTGGGTGGT TTTGAGCGTGTGTTCGAAATCAATCGTAACTTCCGTAACGAAGGTCTGTCACCACGTCATAACCCAGAATTCACTATGAT GGAATTCTATATGGCCTATGCTGACTACCAAGATCTGATGGACTTAACCGAAGAATTGTTAAGCTCAATTGCAATCGAAC TCTTAGGTAGCGCGCAAATGCCATATGGCGAGCATACTGTTGATTTCGGTGGTCCTTATGCCCGTTTAAGCATGCTAGAA GCGATTCAGAAGTACAATCCTGATAACGCGACTATCCAGGCCATGACCTACGAGCAAGTGAAAGATCTTGAATTTATGCG TGAACTGGCTATCAGCCTTGGCATCAAGATTGAGAAGTTCTGGACCTGTGGTCAGCTATTAGAAGAAATCTTCGGTGAAA CCGCTGAATGGCAGTTAATGCAACCGACTTTCATCACTGGCTACCCAGCGGACATTTCGCCACTGGCACGTCGTAACGAT GACAACCACTTTATTACCGACCGTTTTGAATTCTTCATCGGTGGCCGTGAAGTAGCTAACGGCTTCAGCGAGTTAAATGA TGCGCAGGATCAAGACAGCCGCTTTAAAGCGCAGGTTGATGCCAAAGACGCGGGTGACGATGAAGCCATGTTCTACGATG CGGACTACATCACTGCACTGGAACACGGTTTACCACCAACAGCAGGTCAAGGTATCGGTATCGACCGTTTAGTGATGCTA TTCACTAACACTCACACTATCCGTGATGTGATCCTATTCCCAGCGATGCGCCCACAGGCTTAA Protein sequence : MTEQVQDENKLIAERRAKLDSIRPNCSANAHPNTFRRTHKAAELQEKYGQNTKEELEALGFRTSIAGRIMAKRGPFLVIQ DVSGRIQAYAEKGVQADLKDRYQGLDIGDIIGVTGQLHLSGKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRY VDLIVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGG FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYQDLMDLTEELLSSIAIELLGSAQMPYGEHTVDFGGPYARLSMLE AIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKFWTCGQLLEEIFGETAEWQLMQPTFITGYPADISPLARRND DNHFITDRFEFFIGGREVANGFSELNDAQDQDSRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML FTNTHTIRDVILFPAMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-130 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | NP_716620.1 | lysyl-tRNA synthetase LysS | VFG1668 | Protein | 2e-130 | 57 |
