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Name : tnpA (SO_0708) Accession : NP_716341.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : ISSod18 transposase TnpA_ISSod18 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 725665 - 726876 bp Length : 1212 bp Strand : - Note : - DNA sequence : ATGCCAGTATCAGACCAGCTTATCGATCAGTTATTAGCTGATTACGAATCCCCACAAGACCTGCTTGGTGAGCAAGGTAT CCTTAGGCAGTTGACTAAAAAACTTGCTGAGCGTGCTCTTGAAGCCGAGATGGAACTGCATCTTGGTTATGCCAAACATG ATGCGGCAGGTTTTAACACTGGTAACTCCCGCAACGGTAAAAGCCGTAAATCAGTGCGCAGCATTCACGGCGACATTGAG CTTGAAACACCGCGAGACCGTAATGGCAGCTTCGAGCCTAAACTGATTAAGAAAGGCGAGAAACAGCTCGGTGGCTTTGA TGAGCGAATTGTCTCGCTTTACGCCAGAGGCATGTCTACCCGTGATATCCAAGCCCACTTTGAAGAAACCTATGGTGTTG AAGTCTCGCCGACGTTTATCTCTCAGATCACCAATGCCGTATTGGATGAGGTCAAAGCCTGGCAATTGCGGCCATTAGCA CCGGTATACCCGATAGTGTATTTAGACTGTTTGGTCGTGCGTAGCCGTGATTCTGGCAGCATCCAGAACAAATCCGTCTA CCTTGCCCTTGGCGTGAACACCGATGGTGAGAAAGAGCTGCTGGGCTTATGGATAGCACAAACCGAAGGCGCTAAGTTCT GGCTGTCGGTGATGAACGAGCTGAAAAACCGCGGTGTAGAAGATATCTTCATCGCCTGTGTTGATGGGCTAAAGGGCTTT CCCGATGCGATAGAGGCGGTTTACCCTAAAACGCAGGTACAGCTGTGCATCGTGCATCAAATCCGCAACAGCCTGCGCTT CGTCAGTTGGAAAGAGCGTAAAGCCGTTGCAGCAGATCTTAAAACGATTTATGGCGCAGCCACGTTGCAGCAAGCCGAAC TGGCGCTGGAGCAATTTGCAAAGACGTGGGATAAGCAGCATCCAAGCATTAGCAAATCTTGGCGTGAAAACTGGACCAGG CTTAGCGTGTTCTTCGACTATCCCCCGGAAATCCGCAAGGTGATTTACACCACCAACGCCATCGAATCACTCAATGCCAG CCTACGTCAGGTGACCAAGACCAGACGGTCATTTCCGAGCGATGACGCGGTGCTGAAGTTACTGTATCTGGCTTTACACC AGATTGCTAAAAAGTGGACAATGCCACTACGAGATTGGAAGCCTGCCATGACGCAGTTTATGATCATGTACAGTGACCGT GTGTCGTTATGA Protein sequence : MPVSDQLIDQLLADYESPQDLLGEQGILRQLTKKLAERALEAEMELHLGYAKHDAAGFNTGNSRNGKSRKSVRSIHGDIE LETPRDRNGSFEPKLIKKGEKQLGGFDERIVSLYARGMSTRDIQAHFEETYGVEVSPTFISQITNAVLDEVKAWQLRPLA PVYPIVYLDCLVVRSRDSGSIQNKSVYLALGVNTDGEKELLGLWIAQTEGAKFWLSVMNELKNRGVEDIFIACVDGLKGF PDAIEAVYPKTQVQLCIVHQIRNSLRFVSWKERKAVAADLKTIYGAATLQQAELALEQFAKTWDKQHPSISKSWRENWTR LSVFFDYPPEIRKVIYTTNAIESLNASLRQVTKTRRSFPSDDAVLKLLYLALHQIAKKWTMPLRDWKPAMTQFMIMYSDR VSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 5e-105 | 57 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 3e-88 | 48 |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 7e-75 | 47 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 9e-74 | 45 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 7e-69 | 41 |
