Gene Information

Name : tnpA (SO_0596)
Accession : NP_716229.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Unknown
Product : ISSod4 transposase TnpA_ISSod4
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 621892 - 623094 bp
Length : 1203 bp
Strand : -
Note : -

DNA sequence :
ATGACCCAACCTTTTAACTTCGAACAAGCCCTTAAAGATCTGCAGTCAGGTAAAAGCCTCACAGGTAAAGACAGCATTCT
TGGCCCACTGATCAAGCAACTCACTGAAGCGGCTCTCCAGGCTGAGCTTGAGCAGCATTTAGCGCATGATCCTCAGCCTA
ATCGTAAAAATGGCAAAACCCCTAAGACCATTAAGCATCCGTCCGGTAACTTTGAGTTAGACGCTCCTAGAGACCGCAAT
GGCACCTTTGAGCCTCAGTTGATTAAGAAAAATCAAACTACACTAACCGATGAAATCGAACGTAAAGTGTTATCGATGTT
CAGTATAGGTATGAGCTATCGCGATATTAATCAACATGTTGAAGATATGTATGGGCTCAATGTGTCTAACGCAACAGTAA
GCGCCATCACCGACAAACTCATCCCCGAACTTAAAGCGTGGCAACAGCGCCCATTAGATAGCCATTATCCTATCGTTTGG
CTTGATGCGATACATTATAAAGTCAAAGAGGATGGGCGTTACGTCAGTAAAGCCGTTTACACATTGTTAGCGCTTAATAT
GAAAGGAAAAAAGGAAATTTTAGGGCTTCACTTATCCGAAAATGAAGGCGCTAATTACTGGCTATCCGTACTGACCGATC
TTAATAATCGTGGTGTAAAAGATATTCTTATCGCCTGTGTTGACGGCTTGACCGGTTTCCCAGAGGCCATAGCCAGTATC
TTCCCTCATACGGAAACACAGCTATGCGTTATCCACCAGATCCGCAACTCAATGAAGTATGTCGCCTCAAAAAATCAGAA
AGCGTTTATGGCTGATTTAAAGCCTGTGTATCGAGCCGTGAGTAAAGAAGCCGCAGAGATGGCCTTGGACGAACTGGAGG
CCAAATGGGGTGATGCTTATCCGTTGGTAATCAACTCTTGGCGTCGCAAATGGCATAATTTGTCCCATTATTTTAAGTAC
CCAGAACATATCAGGAAAGTGATTTACACGACCAATGCGGTTGAGGCTGTACATCGCCAATTTAGAAAGCTCACCAAAAC
CAAAGGTGCATTTCCTAATGAAAATAGCTTGTTGAAGCTACTTTACGCAGGCATATTAAACGCCTCAGATAAATGGACTA
TGCCAATCCACAATTGGAGCCTTTGTTTATCTCAGTTAGCGATTTATTTTGAAGGACGTTTAGATAGCGTGCTAGAAATT
TAA

Protein sequence :
MTQPFNFEQALKDLQSGKSLTGKDSILGPLIKQLTEAALQAELEQHLAHDPQPNRKNGKTPKTIKHPSGNFELDAPRDRN
GTFEPQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHVEDMYGLNVSNATVSAITDKLIPELKAWQQRPLDSHYPIVW
LDAIHYKVKEDGRYVSKAVYTLLALNMKGKKEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASI
FPHTETQLCVIHQIRNSMKYVASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDAYPLVINSWRRKWHNLSHYFKY
PEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKLLYAGILNASDKWTMPIHNWSLCLSQLAIYFEGRLDSVLEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 1e-82 49
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 1e-83 46