Gene Information

Name : rph (SO_4256)
Accession : NP_719783.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Unknown
Product : ribonuclease PH Rph
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4432347 - 4433060 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
ATGCGTCCAAGTAACAGAACGCCAGCACAAACACGTCCCATCACTATCACTCGCCAATTTACGGCCCATGCCGAAGGTTC
TGTGTTAGTGGAGTTTGGCGAAACCAAAGTGCTTTGCACCGCCAGTTTTACTGAAGGTGTGCCACGTTTCCTTAAAGGTC
AGGGTCAAGGCTGGGTGACGGCGGAATACGGCATGTTGCCACGCTCAACCCATAGCCGTATGGACCGTGAAGCCGCTCGT
GGTAAACAATCTGGTCGTACGCAAGAAATTCAACGCCTTATCGGTCGTGCGTTGCGTGCCTGTGTCGATATGAAAGCGCT
GGGTGAAAACACCATTGTCATCGATTGTGATGTGATCCAAGCCGATGGCGGTACCCGTACTGCGTCAATCACCGGTGCCT
GTGTTGCCTTAGTGGATGCGCTGAACTGGGCCCGTGGTAAAGGCATTATTAAATCTAACCCGCTTAAGTTCTTAATTGCA
GCGGTCAGCGTGGGTATCTACAACGGTGAAGCGATAAGCGATTTAGAGTATGTGGAAGACAGCGCTGCCGAAACCGATAT
GAACGTGGTAATGACAGAAACCGGTAAGATTATCGAAATTCAAGGCACTGCCGAAGGTGAGCCGTTTACTCACGAAGAGT
TGATTGAGCTACTCGGTTTAGCGAAGAACAGTATTCGCGAAATCGTTGATGTACAGAAAGCCGCTTTAAACTAA

Protein sequence :
MRPSNRTPAQTRPITITRQFTAHAEGSVLVEFGETKVLCTASFTEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMDREAAR
GKQSGRTQEIQRLIGRALRACVDMKALGENTIVIDCDVIQADGGTRTASITGACVALVDALNWARGKGIIKSNPLKFLIA
AVSVGIYNGEAISDLEYVEDSAAETDMNVVMTETGKIIEIQGTAEGEPFTHEELIELLGLAKNSIREIVDVQKAALN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-64 58