Gene Information

Name : ttrR (SO_4157)
Accession : NP_719686.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Virulence
Product : thiosulfate/tetrathionate-responsive two component signal transduction system response regulator TtrR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4332031 - 4332639 bp
Length : 609 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCACCATGCTGCCACTGTATTTAGTCGATGATGATGAAGCGATTCTCGACTCCTTAGGGTTTATGCTCAGGCAATT
TGGTTACCAAGTACAAACCTTTAGCAGTGGACGGGATTTTTTAGCCCAATGTCCGTTAACACAGGCTGGCTGCGTGATTT
TAGATAGCCGAATGCCGGAGATCACCGGCCAAGAAGTGCAGCAAAAACTACTTGAAACCCAAAGCCCATTGGGAGTTATC
TTTCTCACGGGGCACGGTGATTTGCCCATGGCATTAAGCGCCTTTCGTAAGGGTGCATGCGATTTTTTTCAAAAGCCGGT
ATCTGGCAAAGCCCTAGTACAAGCCATTAAAAAAGCGCATAAAGAAAGCCAAGCCAGCTTTGAGCAACAGAGTCTGCAGC
ATAAATTTGCCCAACTGACCGACCGTGAACAACAAGTGTTAGCCCATGTGGTTCAAGGTATGACCAACAAGCAGATCTCC
GAGGCCATGTATTTATCCTTAAGAACCATTGAAGTGCACCGCGCTAAGATCATGAAAAAGCTCGAAGTCAGTAATATGGC
AGAATTAGTACAGCACTTAGCCCACCTAAATACACTCTTACCGGAGTAA

Protein sequence : 
MSTMLPLYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITGQEVQQKLLETQSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIKKAHKESQASFEQQSLQHKFAQLTDREQQVLAHVVQGMTNKQIS
EAMYLSLRTIEVHRAKIMKKLEVSNMAELVQHLAHLNTLLPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 5e-36 43
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 4e-36 43
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 5e-36 43
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 5e-36 43
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 3e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ttrR NP_719686.1 thiosulfate/tetrathionate-responsive two component signal transduction system response regulator TtrR VFG0488 Protein 9e-37 42