|
Name : tnpA (SO_4000) Accession : NP_719530.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : ISSod3 transposase TnpA_ISSod3 Function : - COG functional category : - COG ID : - EC number : - Position : 4136791 - 4138005 bp Length : 1215 bp Strand : + Note : - DNA sequence : GTGCAAGTGTTAACTATCTTACATCAATCTCTCTATCAACATTGTCCAGAAATCCATCAAAAGCGACTGAATACACTCAT GGTCGCCTGCAAAGCCCTCATCAACGCGGATTGTCTCACCCTCACGCATTTAGGGCGGCACATTGATGGCACCAGCACTC ATACTAAACACTCAATAAAACGCATGGATAGATTATTGGGCAACCCGCACCTTCACCATGAAAGACTGGCTGTTTATCAG TGGCATGCAAAGTGGCTGCTAACAGCACATACGATGCCGACCATACTGGTGGATTGGTCTGATATGCGTGAAGGTCGTGA ACTGATTGCACTACGCGCCTCTATTGCGATTAAGGGCCGCTCTATCACGCTCTACGAGCGAACATTTCCGTTAGTACTAC AAGGCACACAAACTGCCCATAATCAGTTTCTGAATGAACTCCATAAAGTGTTACCTGACAATATTACCCCGCTGATAGTC ACTGACGCGGGCTTCCGTAATCCATGGTTTCGAAAAGTCGAGCAGCTCGGTTGGTATTGGCTGGGTCGTGTCAGAGGATT AAGTGTCTATCGGCTGCACCCCTTCGGTCGCCAATTTTCGCTAAAAGCGCTTTATCCCAAAGCCAGTCGTCGCGCAAAAC ATGTTGGGCGAGTGGCGTTATCGGTAAAGAAACCCTTGTTATGCGAGATGGTATTGTTCAGGGCTCCAAGTAAAGGCAGA AAAGGTCAGCGAAGTACGACAACAGACTGTCACCATACGGCGCAATGGACGTATGAACTGACCGCCAAAGAGCCTTGGGC ACTGGTGACCAACTTGACCATAGAAGCCATGTCGCCTCAAAAACTGGTTAATATTTACCAAAAACGGATGCAAATAGAAG AAACCTTTAGAGATTTAAAAAGCCCCGCTTATGGCTTTGGTTTACGTCATAGCAGAACACGTTATGCGGCGAGGATGGAC ATACTGCTATTGATAGCATTATTGGTACAACTGGCATTTTGGTGGGTAGGATTATACGGAGAAACACAGCAATTACAGCG GCACTTCCAAGCCAACACGGTAAAGAAAAGGAATGTGCTATCAACAATCAGGATGGGCAAAGAACTGCTGCGGCGACGGC ATGACTACCCCATATCAGCAGATGATTTGCTTTGTGCTGCGAAGAAACTAGCCCAACTCTCATTAACTCATGGTTGTTGG GGCTATGAATTATGA Protein sequence : MQVLTILHQSLYQHCPEIHQKRLNTLMVACKALINADCLTLTHLGRHIDGTSTHTKHSIKRMDRLLGNPHLHHERLAVYQ WHAKWLLTAHTMPTILVDWSDMREGRELIALRASIAIKGRSITLYERTFPLVLQGTQTAHNQFLNELHKVLPDNITPLIV TDAGFRNPWFRKVEQLGWYWLGRVRGLSVYRLHPFGRQFSLKALYPKASRRAKHVGRVALSVKKPLLCEMVLFRAPSKGR KGQRSTTTDCHHTAQWTYELTAKEPWALVTNLTIEAMSPQKLVNIYQKRMQIEETFRDLKSPAYGFGLRHSRTRYAARMD ILLLIALLVQLAFWWVGLYGETQQLQRHFQANTVKKRNVLSTIRMGKELLRRRHDYPISADDLLCAAKKLAQLSLTHGCW GYEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | AEA34674.1 | IS10 transposase | Not tested | Not named | Protein | 6e-96 | 56 |
| tnp | AEA34664.1 | IS10 transposase | Not tested | Not named | Protein | 6e-96 | 56 |
| IS10 | CAI43894.1 | transposase for IS10 | Not tested | LEE | Protein | 3e-96 | 56 |
| SF2983 | NP_708757.1 | iso-IS10R ORF | Not tested | SHI-1 | Protein | 3e-96 | 56 |
| IS1999 | CAJ77042.1 | Insertion sequence | Not tested | AbaR1 | Protein | 2e-93 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tnpA | NP_719530.1 | ISSod3 transposase TnpA_ISSod3 | VFG0647 | Protein | 1e-96 | 56 |
