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Name : kdsD (SO_3956) Accession : NP_719486.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase KdsD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 4098655 - 4099632 bp Length : 978 bp Strand : + Note : - DNA sequence : ATGGTAGACCAATCACAATTGCGCCAATGGGGCTGTAAAGTCATCGATATTGAAAAATCGGCCCTCGACAACCTTTATCA GTACGTCGATTCCGCTGAATTCGCCCAAGCCTGTGAATTAATTCTCAACTGTAGCGGCAAAGTCATCGTGATGGGGATGG GGAAATCCGGCCATATTGGCAATAAAATCTCAGCCACCCTCGCCAGTACAGGCACTCCGGCCTTCTTTGTGCATCCAGGC GAAGCCAGCCATGGCGACTTAGGCGTACTCTCTGACAACGATATTATTCTCGCCATTTCGAACTCGGGCGAATCAAGTGA AATCCTCGCACTGATGCCCGTTATCCAGCGTAAAGCCATTCCGGTGATAGCCATGACGGGCAAACCTGAGTCCACTATGG CACGTTTGGCCAAAATTCATTTATGCATTGAAGTACCAGAAGAAGCCTGCCCGCTCGGGCTCGCCCCCACGTCAAGCACC ACCGCAACCTTAGTGATGGGTGATGCGATGGCGATTGCACTGCTGCAAGCTAAAGGCTTCACCCGAGACGATTTCGCTAT GTCTCACCCAGGCGGCGCCTTGGGTCGTAAACTACTGTTAAAAGTCAGTAATGTGATGCACTGCGGCGATGACTTACCGC TGGTCAAACACGATATCTGCATTACCGATGCCCTGTATGAAATCTCCAAAAAAGGCCTCGGCATGACCGCGATTATCGAT GAGCAAAACAAACTCGTGGGTATTTTTACCGATGGCGACTTACGCCGCGTCATCGATGCCCAAGTCAACCTGCGCACCAC ACCGATCGCCGATGTGATGACGCGAAACTGTGTCACTATTACTGAAAACGTATTAGCAGCGCAGGCGCTGCAAGTGATGG ACTCTAGAAATATCAACGGCCTAATAGTGATAGATAAAGAAAATCATCCTGTCGGCGCACTCAATATGCTCGATATGGTT AAAGCGGGAGTCATTTAA Protein sequence : MVDQSQLRQWGCKVIDIEKSALDNLYQYVDSAEFAQACELILNCSGKVIVMGMGKSGHIGNKISATLASTGTPAFFVHPG EASHGDLGVLSDNDIILAISNSGESSEILALMPVIQRKAIPVIAMTGKPESTMARLAKIHLCIEVPEEACPLGLAPTSST TATLVMGDAMAIALLQAKGFTRDDFAMSHPGGALGRKLLLKVSNVMHCGDDLPLVKHDICITDALYEISKKGLGMTAIID EQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSRNINGLIVIDKENHPVGALNMLDMV KAGVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-56 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-56 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 6e-56 | 43 |
