Gene Information

Name : alr (SO_3916)
Accession : NP_719447.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Unknown
Product : alanine racemase biosynthetic Alr
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 4062295 - 4063371 bp
Length : 1077 bp
Strand : -
Note : -

DNA sequence :
TTGAAACCTTTTCCCCGAGCAGAAATTAGCAGTAGTGCACTGCAAAACAACCTCGCCGTTTTACGCCAGCAGGCGAGCAG
CAGTCAAGTCATGGCCGTGGTGAAAGCCAATGGATATGGACATGGATTATTAAATGTTGCCAAATGCTTAAACAATGCCG
ATGGTTTCGGCTTAGCTCGTTTGGAAGAGGCATTAGAGCTGCGCGCAGGTAGTGTTAAGGCGCGCTTATTATTGCTTGAG
GGTTTTTTTCGCAGCACCGACTTACCTTTGCTGGTGGAGCACGATATTGATACTGTGGTGCATCACGAATCGCAAATCGA
GATGTTAGAACAGGCGACACTATCGAAACCAGTGACAGTATGGTTGAAAGTCGATTCGGGGATGCATCGTTTAGGGGTCA
CGCCTGAACAGTTCTCAGCGGTTTATGCGCGTTTGACGGCCTGTAAAAATGTCGCCAAGCCTATCCATCTGATGACCCAC
TTTGCCTGTGCCGATGAGCCCGACAATCATTACACTCAAGTGCAAATGCAAACCTTTAACCAGTTAACTGCAGATTTACC
TGGGTTTAGAACCTTAGCGAACTCGGCGGGTGCGCTTTATTGGCCGAAGAGCCAAGGTGATTGGATCCGTCCAGGCATTG
CGATGTATGGTGTGTCACCCGTTACTGGGGATTGCGGCGCAAATCATGGTTTGATCCCTGCAATGAACTTGGTTTCACGT
TTGATAGCGGTGCGCGAGCACAAAGCGAATCAACCCGTAGGTTATGGTTGTTACTGGACCGCCAAACAAGATACTCGTCT
TGGCGTTGTCGCGATTGGTTATGGTGATGGCTATCCACGTAATGCGCCGGAAGGCACGCCTGTATGGATAAATGGCCGCA
GAGTGCCGATTGTTGGCCGGGTATCTATGGATATGTTAACAGTGGATTTAGGCCATGATGCAACAGATCAAGTCGGTGAT
GATGTTTTGCTTTGGGGTCAGGCTTTACCTGTTGAAGAAGTCGCTGAGCATATTGGTACTATCGCCTATGAGTTAGTGAC
TAAGCTGACTCCGAGAGTCGCTGTTTGCTTAGCATAG

Protein sequence :
MKPFPRAEISSSALQNNLAVLRQQASSSQVMAVVKANGYGHGLLNVAKCLNNADGFGLARLEEALELRAGSVKARLLLLE
GFFRSTDLPLLVEHDIDTVVHHESQIEMLEQATLSKPVTVWLKVDSGMHRLGVTPEQFSAVYARLTACKNVAKPIHLMTH
FACADEPDNHYTQVQMQTFNQLTADLPGFRTLANSAGALYWPKSQGDWIRPGIAMYGVSPVTGDCGANHGLIPAMNLVSR
LIAVREHKANQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNAPEGTPVWINGRRVPIVGRVSMDMLTVDLGHDATDQVGD
DVLLWGQALPVEEVAEHIGTIAYELVTKLTPRVAVCLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 8e-55 44