Gene Information

Name : SO_3887 (SO_3887)
Accession : NP_719418.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Virulence
Product : protein of unknown function DUF2787
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4034187 - 4034591 bp
Length : 405 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACCATGAATACCGACCTACCGTTACCCGTGTCACCAGTCTTTGCCCAAGCACTGGCAGAGCTGGTGAAAAATAT
TGATAGCAAGGCTGTCACCATTAACTTTCGCAACCCTGATTACAGTCCACAAACGGGCGGCTTTCATCCCGTGGAAATCA
GGCTAGAGAAAGGTGATGACCAGTGGCAGTTATGTTACATCACCGACTTTTGCTATGTCGGCTATCAGGGACAATGGGAA
TTAGTGAAAGAGCTGGACTTTGATTTTAGCTGCGGCGTGTTTCAGTCCATTAGTGGCTTGTTAGTCATTGAATCGGCAGC
TGAGCTTTATCCCATTTGGGAGCAAAACTTCTTCTGTTACTGGCAGGAAATGGACGTTTTTAATGTCAGCATTTCGACGG
ACTAA

Protein sequence :
MKTMNTDLPLPVSPVFAQALAELVKNIDSKAVTINFRNPDYSPQTGGFHPVEIRLEKGDDQWQLCYITDFCYVGYQGQWE
LVKELDFDFSCGVFQSISGLLVIESAAELYPIWEQNFFCYWQEMDVFNVSISTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1805 NP_231440.1 hypothetical protein Not tested VPI-2 Protein 1e-13 42
VC0395_A1402 YP_001217345.1 hypothetical protein Not tested VPI-2 Protein 1e-13 42
VPI2_0036 ACA01851.1 hypothetical protein Not tested VPI-2 Protein 1e-13 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SO_3887 NP_719418.1 protein of unknown function DUF2787 VFG1138 Protein 4e-14 42