Gene Information

Name : SO_3692 (SO_3692)
Accession : NP_719232.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Resistance
Product : ABC-type macrolide family export system ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3843152 - 3843892 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
ATGTTATCAATGAAGAATATCAGTAAGGTTTTTAAAACGGACTTAGTGGAAACCCATGCGCTGCGGGATTTTAATCTTGA
GGTGAGCGAGGGCGAGTTTGTGGCGGTGACAGGGCCCTCTGGATCGGGCAAAACCACCTTTCTAAATATTGCAGGCTTAC
TCGAAGGCTTTACCCATGGGGATTACTTTTTAGATGGCATCAATGTCTCAAACCTCAGTGATAACAAAAGCGCCGCCGTA
CGTAATGAGAAAATTGGCTTTATTTTCCAAGGTTTTAACCTGATCCCCGATCTTAATTTAGCCGAAAACATTGAAGTGCC
ACTGCGTTACCGTGGCTTTAGCGCCAAAGAGCGTAACCGCCGCGTGGAACAGGCGCTGGAGCAAGTCGGTTTAGCTGCCC
GCATGAAGCATTTACCTACCCAATTATCTGGCGGTCAGCAACAAAGGGTGGCGATTGCCCGTGCACTTGCGGGTGAGCCA
CGGTTTTTACTCGCCGACGAACCAACCGGTAACCTCGACAGTTTAATGGCACGTCAAGTGATGGAATTACTTGAAAATAT
TAATCAGGCAGGCACCACTATTATCATGGTAACCCATGACCCTGAACTGGCGCGCCGCGCCCAGCGCAATATTCAAATCG
TCGATGGTCAAGTCTGCGACTTTACCATGTATCAACCCAATGTGGCCCGCAGCGCAAGCCTCGGCAGCGTCGATAAACTG
GTTGCTAACGCCCAAGGCTAG

Protein sequence : 
MLSMKNISKVFKTDLVETHALRDFNLEVSEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYFLDGINVSNLSDNKSAAV
RNEKIGFIFQGFNLIPDLNLAENIEVPLRYRGFSAKERNRRVEQALEQVGLAARMKHLPTQLSGGQQQRVAIARALAGEP
RFLLADEPTGNLDSLMARQVMELLENINQAGTTIIMVTHDPELARRAQRNIQIVDGQVCDFTMYQPNVARSASLGSVDKL
VANAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SO_3692 NP_719232.1 ABC-type macrolide family export system ATPase component NC_008702.1.4606598. Protein 1e-45 52
SO_3692 NP_719232.1 ABC-type macrolide family export system ATPase component NC_012469.1.7686878. Protein 7e-52 50
SO_3692 NP_719232.1 ABC-type macrolide family export system ATPase component CP001581.1.gene798.p Protein 4e-38 46