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Name : clpB (SO_3577) Accession : NP_719122.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Virulence Product : stress-induced multi-chaperone system component ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3742479 - 3745052 bp Length : 2574 bp Strand : - Note : - DNA sequence : ATGCGACTCGATCGTATGACCAATAAATTTCAGCTTGCCATCTCAGATGCCCAGTCGTTAGCTCTTGGGCGTGATCATCA GTTTATCGAACCGCTACATTTGATGATGGCGCTGCTCAACCAGGATTCTGGTTCTATCCATCCTTTATTAACCCAAGCTG GTATTCGGGTGAGTGCATTGCGTTCGCTTTTGAGCCAAGAGCTTGAGCGTCTTCCCCAAGTTGAAGGCACTGGCGGCGAT GTACAGTTATCCCAAGGGTTAATTCGTTTATTAAACCTTTGCGATAAATTGGCGCAAAAGCGTAAAGACAAATATATCTC CAGCGAATTGTTCGTTCTCGCGGCGCTTGAGGGCTGCGATGCACTAGCGCAATGCCTCAAAAAATCCGGCGCGACCAAAG AGCTGATGGAACAAACCATTGAGCAAGTGCGTGGTGGGCAAAAAGTGGATGATCCCAATGCGGAAGATCAACGCCAAGCG CTGAAAAAGTTTACCGTCGATCTTACTGAACGTGCTGAGCAGGGCAAACTCGATCCTGTGATTGGCCGTGATGATGAAAT TCGTCGCACGATTCAAGTCTTGCAACGTCGAACTAAAAATAACCCTGTGCTTATTGGTGAGCCTGGGGTGGGTAAAACGG CCATTGTCGAAGGGCTTGCTCAGCGGATTGTGAACGGTGAAGTACCTGAAGGTATTAAAAATAAACGTGTTTTATCCTTA GATATGGGGGCATTAATTGCGGGCGCTAAATACCGGGGAGAGTTCGAGGAGCGTTTAAAAGCCGTGCTTAACGAGCTGGC GCAGGAAGAAGGCCAAGTGATCCTCTTTATCGACGAGCTACACACTATGGTGGGCGCGGGCAAGGGCGATGGCGCAATGG ATGCGGGCAATATGTTAAAACCTGCTTTGGCTCGTGGCGATCTCCACTGCGTAGGGGCTACTACTCTCGACGAGTATCGC CAATATATTGAAAAAGATGCCGCCCTTGAGCGTCGTTTCCAAAAAGTATTAGTGGATGAGCCAAGCGTTGAAGACACCAT CGCGATTTTGCGTGGCTTGAAAGAGCGTTATGAGCTGCATCACCATGTGGAAATTACCGATCCAGCGATTGTGGCGGCGG CGACGATGTCGCACCGTTATGTGTCGGATCGTAAATTACCTGATAAAGCCATCGATTTAATTGACGAAGCGGCATCGAGC ATCCGTATGCAGATGGATTCCAAGCCTGAATCCCTCGACAGGCTCGAACGTCGTGCTATCCAGCTCAAACTGGAGGAGCA AGCGTTAGCCAAAGAAAATGATGAGGCGAGTCGTCGAAGGCTAGATCATTTGCAAGAGGAATTGCGTGACGTTGAAGCTA AGGCTTCTGAGCTGAGCGAAATCTGGCGTACCGAAAAGGCTGCCCTTGCTGGTACTCAGCATATTAAAGCCGATTTGGAA CAAGCGCGGCTGGACTTAGAAGTCGCGCGCCGCGCAGGTGATTTAACTCGTATGTCTGAATTGCAATATGGCCGCATTCC AGAGCTTGAAAAGCAGCTGGATTTAGCATCGCAAGCTGAAATGCAGGATATGACCCTGCTGCGTAATAAAGTCACCGACT TAGAAATTGCCGAAGTATTGTCTAAGGCAACGGGTATTCCTGTGTCTAAGATGCTCGAAGGCGAGCGTGAAAAACTGTTG CAGATGGAAGTGGCATTACATGAGCGTGTGATTGGCCAAAATGAAGCTGTAGATGCGGTCGCCAATGCGATTCGTCGCAG CCGAGCTGGGCTTGCCGATCCAAATCGCCCGATTGGTTCGTTCCTGTTTTTAGGACCAACTGGTGTGGGTAAAACTGAGC TGTGTAAGTCGTTAGCTAGATTCTTATTTGATAGTGAATCAGCCTTAGTGCGCATCGACATGTCCGAGTTTATGGAAAAA CATGCAGTTTCACGTTTGGTTGGTGCTCCTCCTGGATATGTTGGTTATGAAGAGGGCGGTTACTTAACTGAAGCAGTTCG TCGTAAGCCTTATTCAGTGATTTTGCTCGATGAGGTGGAAAAGGCGCACCCTGACGTGTTCAACATTTTGCTGCAAGTAT TGGATGATGGCCGCTTAACCGATGGTCAAGGTCGCACTGTCGACTTTAGAAATACGGTGATCATCATGACCTCGAACTTA GGTTCCGACATTATCCAAGAAGGATTCGGCCATTTAAGTTACAGCGAAATGAAGAGCGCGGTGATGAATGTGGTGACCCA TAGCTTTAGACCCGAGTTCTTAAACCGGATCGATGAGTCTGTGGTATTCCATCCCTTGGATGCAGAAAATATCAAGCATA TTGCTTCTATCCAAATTGCTTCATTGCGTAAGCGTTTGGCAGAGAAAGACTATACCCTGGAGATCACCGACGAGGCATTA TCGTTGATCGCAGAAATTGGTTTCGACCCTGTCTATGGTGCAAGACCACTAAAACGAGCCTTGCAACAAGAGATGGAAAA TCCGCTAGCGCAAAAACTACTGCGTGGTGATTTGCTACCCGGCAAACCTATCAAGGTCAGCTGTGTGGATGGTGAACTGG TATTTGAGCAATAA Protein sequence : MRLDRMTNKFQLAISDAQSLALGRDHQFIEPLHLMMALLNQDSGSIHPLLTQAGIRVSALRSLLSQELERLPQVEGTGGD VQLSQGLIRLLNLCDKLAQKRKDKYISSELFVLAALEGCDALAQCLKKSGATKELMEQTIEQVRGGQKVDDPNAEDQRQA LKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL DMGALIAGAKYRGEFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYR QYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLIDEAASS IRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRRRLDHLQEELRDVEAKASELSEIWRTEKAALAGTQHIKADLE QARLDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTDLEIAEVLSKATGIPVSKMLEGEREKLL QMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKSLARFLFDSESALVRIDMSEFMEK HAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL GSDIIQEGFGHLSYSEMKSAVMNVVTHSFRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKDYTLEITDEAL SLIAEIGFDPVYGARPLKRALQQEMENPLAQKLLRGDLLPGKPIKVSCVDGELVFEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-145 | 44 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-94 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-94 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_719122.1 | stress-induced multi-chaperone system component ClpB | VFG0079 | Protein | 1e-135 | 43 |
| clpB | NP_719122.1 | stress-induced multi-chaperone system component ClpB | VFG2076 | Protein | 2e-106 | 41 |
