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Name : gabD (SO_3496) Accession : NP_719045.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NAD(P)+] GabD Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 3646151 - 3647647 bp Length : 1497 bp Strand : - Note : - DNA sequence : ATGAGTACACCTAAAACACGGAGCGATTGGGAAAACCTCGCTGTAAGCCTAGCAATCAATGGCAAGGCTTTTATTAATGG CGAATACCGCGATGCGTCATCGGGTAATACCTTTGATTGCATCAGTCCAATCGATGGCCGTTTATTAGCGCCAGTTGCCA GTTGCGATTTGATGGACGCCAATATTGCTGTGGCCAATGCTCGTGAGGTTTTTGACTCTGGGGTATGGTCAAAGGCGGCG CCTGTTAAACGTAAACAAGTGATGATCCGTTTTGCCGAGTTATTGGAAGAAAACGCCAATGAGCTGGCCCTATTAGAAAC GTTGGATATGGGCAAACCGATACGTTTTTCAAAGGCGGTGGATGTTGCTGGTGCTGCCCGTGCCATCCGTTGGTCAGGGG AAGCGATTGACAAACTTTATGACGAACTGGCGCCTACTGCGCATAATGAAATCGGCATGATCACCCGTGAACCCGTGGGC GTGGTGGCGGCGATTGTGCCTTGGAATTTCCCGCTGCTAATGGCCTGTTGGAAGTTAGGTCCAGCGCTCGTTACGGGGAA CAGTGTTATCCTTAAACCCTCTGAAAAATCACCGCTCACCGCCATTCGTATTGCCGAGCTTGCCGTTCAAGCTGGGATCC CTAAAGGTGTATTAAACGTGCTACCAGGCTATGGCCATACTGTCGGCAAAGCACTGGCGCTGCATATGGATGTCGATACC TTAGTCTTTACTGGCTCAACAAAAATCGCTAAGCAATTAATGATTTATGCGGGCGAGTCGAATATGAAGCGGGTCTGGTT AGAGGCGGGCGGTAAAAGCCCGAACATCGTATTTAACGATGCGCCTGATCTTAAGGCTGCGGCGGTGGCTGCCGCTGAAG CCATTGGCTTTAACCAAGGTGAAGTTTGTACTGCGGGTTCACGTTTGCTGGTGGAATCTGGTGTTAAAGATGAGCTTGTT GGACTTATAGCTGAAGAGTTGGCTTCTTGGCAGCCCGGTCATCCACTCGAACCAACGACTGTCAGTGGTGCCGTGGTCGA TAAGCAGCAGCTTGACACCATCTTAAGCTACATCAAGGCTGGGCAAAATGAGGGGGCAAGCCTAGTCTATGGCGGGCAAC AAGTGCTGGCCGAAACGGGCGGTGTGTATGTGCAGCCAACGGTATTTTCAAATGTGAAAAACCAAATGAAAATTGCCAGC GAGGAAATCTTTGGCCCTGTATTATCTGTTATTGAATTCAATGGTATGGAGGAGGCGATTGCGATCGCTAACGATACCAT TTACGGTTTAGCGGCAGGTGTTTGGACGGCGGATATCAGCAAGGCGCATAAAACGGCTAAAGCATTGCGTAGTGGCATGG TGTGGATTAACCATTATGATGGTGGCGATATGACCGCACCTTTTGGTGGTTATAAACAGTCTGGTAATGGCCGAGATAAA TCTCTGCATTCCTTTGATAAATACACTGAAATCAAGGCAACTTGGATAGTGTTATAA Protein sequence : MSTPKTRSDWENLAVSLAINGKAFINGEYRDASSGNTFDCISPIDGRLLAPVASCDLMDANIAVANAREVFDSGVWSKAA PVKRKQVMIRFAELLEENANELALLETLDMGKPIRFSKAVDVAGAARAIRWSGEAIDKLYDELAPTAHNEIGMITREPVG VVAAIVPWNFPLLMACWKLGPALVTGNSVILKPSEKSPLTAIRIAELAVQAGIPKGVLNVLPGYGHTVGKALALHMDVDT LVFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFNDAPDLKAAAVAAAEAIGFNQGEVCTAGSRLLVESGVKDELV GLIAEELASWQPGHPLEPTTVSGAVVDKQQLDTILSYIKAGQNEGASLVYGGQQVLAETGGVYVQPTVFSNVKNQMKIAS EEIFGPVLSVIEFNGMEEAIAIANDTIYGLAAGVWTADISKAHKTAKALRSGMVWINHYDGGDMTAPFGGYKQSGNGRDK SLHSFDKYTEIKATWIVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 9e-118 | 55 |
