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Name : ribD (SO_3469) Accession : NP_719018.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 3614180 - 3615325 bp Length : 1146 bp Strand : - Note : - DNA sequence : ATGAATTGGTCAGTACTCGATAACCAAATGATGAGCCGAGCTATTCAATTGGCTCGCAAAGGATTTTATACCACTCGCCC CAATCCCAGTGTGGGCTGCGTTATCGTTAACGATAACCAGATTGTCGGTGAAGGTTATCATCAAAAAGCCGGAGAGCCCC ACGCTGAAGTGCATGCGCTGCGCATGGCTGGCGAGCTTGCCCGTGGCGCGACTGCTTATGTCACCTTAGAACCCTGCAGC CATTATGGTCGTACGCCGCCCTGCGCCTTGGCGCTGATCAATATTGGTGTAAAGCGGGTGGTGGTGGCGGTTGAAGATCC TAATCCGCAGGTCGGCGGGCGCGGTATTCAAATGCTGCGCGATGCGGGTATTCAAGTGGATGTGGGCTTGCATCGTGATG AGGCCTATGCCTTAAATCTTGGTTTTATGAAGCGCATGGAGTCGGGTCTACCTTGGGTGACGGTAAAGCTTGCCGCGAGT CTTGATGGTAAAACTGCGTTATCAAACGGGGTGTCTAAATGGATCACTGGCCCTGAAGCTCGCCGCGATGTGCAGCGCTT AAGATTACGATCCTGCGCGCTGATCACGGGGATTGAAACGGTACTGGCCGATGATCCATCGCTCAATGTGCGCTACTCAG AGCTTGGCAGTTTAAGAGCGCAATTGAGTGAGTCGCAGGTTTTACAGCCGCTGCGAGTGGTTTTGGACAGTCGCGCCCGC ATGCCTATCACGGCAGCATTGTTTGCGATTGAATCACCCATTTTATTAGTCTCGACAGTGAGCTATTCGTCAGACTTTAT GGTGCAATTACCCGCCCATGTGACTTGCCTCCAATTACCAGCCATTGAGGGTCGAATCTCCTTGTCTGCACTATTAAGCT ATTTAGGCAAAAGCTGTAATCAGGTGCTTATCGAAGCGGGCGCGACTTTAGCTGGCGCCTTTATCGGCTCAGGATTAGCC GATGAATTAGTGCTTTATCAAGCGATGAAAATCCTTGGCGGCCAAGGACGTAATCTACTTGAATTACCCGATTATCAAAT GATGGCCGATATTCCGACCCTCAAATTGGTCGACGAGCGTAAAGTGGGCGCGGATACGCGCTTCACCTTGAGGCTCGAGT CCAATCCATCTTTAGCGAATAAGTGA Protein sequence : MNWSVLDNQMMSRAIQLARKGFYTTRPNPSVGCVIVNDNQIVGEGYHQKAGEPHAEVHALRMAGELARGATAYVTLEPCS HYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIQVDVGLHRDEAYALNLGFMKRMESGLPWVTVKLAAS LDGKTALSNGVSKWITGPEARRDVQRLRLRSCALITGIETVLADDPSLNVRYSELGSLRAQLSESQVLQPLRVVLDSRAR MPITAALFAIESPILLVSTVSYSSDFMVQLPAHVTCLQLPAIEGRISLSALLSYLGKSCNQVLIEAGATLAGAFIGSGLA DELVLYQAMKILGGQGRNLLELPDYQMMADIPTLKLVDERKVGADTRFTLRLESNPSLANK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 4e-70 | 50 |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 4e-70 | 50 |
