Gene Information

Name : SO_3386 (SO_3386)
Accession : NP_718940.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Virulence
Product : bifunctional protein of unknown functions DUF523 and DUF1722
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 3524651 - 3525604 bp
Length : 954 bp
Strand : -
Note : -

DNA sequence : 
ATGTACAAGTTTAATCCACAGCGTATTCAAATAGGGATTAGTGCCTGCCTCTTAGGAGAAAAGGTTCGTTTTGATGGCGG
TCATAAAAATTCCTCCTATTGTAATCAAGAAATTGCATCATTTTTTGATTATGTTCCTATTTGTCCAGAAATGGCGATTG
GTCTAGGTGCACCCCGTAAAAGTATTCGTTTAGTACGCGATGGTGAGCAAATTCGAGTACAGAGTGGGGATGGTAGCTTG
GATGTCACCGAAAAACTCAATGATTTTAGTGAGCGCAAAGTAGAAGAGTTAGATTTTTTAGGGGGGTACCTGCTGTGTGC
TAAATCCCCAACCTGCGGAATGGAACGTGTGACAGAGTACAAGATTGGCACCAATAACGGCTCTAAATCCGGTATTGGCG
TATTTGCCCGCAAATTGATGGAACGTTATCCCCATTTACCGGTTGAAGAAGAAGGGCGTTTGCACGATATGGTGCTGCGG
GAAAACTTTTTTACAAGGGTCTATGCCTATCACGATTGGCACAAGATGCGTCACGAGGGGCTAACTAAGCATAAGTTAGT
GAAATTTCACTCCCGTTATAAGTACTTATTAATGGCCCATAGTCCCAAATGGTATCGCGAGCTTGGGCCCATTGTGGCCA
ATATTGAGGATATTGAAGCGACCGCTGACTGCTATTTTACCGGCTTTATGGCCGCCTTAAAAATCAATGCGACCCGTAAA
AACCATACCAGCACCTTACAGCATATTCAGGGCTATTTTAAAAAGCATTTAACCAAGGAGCAAAAGCTAGAGCTGTCAGA
GATGATTATGAAGTATCGTCAAGGACTCTTGCCACTATTGGTACCTATCACCTTGATTAATCACTACTTAAGACAATTTC
CAACACCTTATATTGAAGATCAAGTGTACTTAAATCCTCATCCAGAGGAATTAAAGTTACGTTACGCCTATTAG

Protein sequence : 
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIASFFDYVPICPEMAIGLGAPRKSIRLVRDGEQIRVQSGDGSL
DVTEKLNDFSERKVEELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGSKSGIGVFARKLMERYPHLPVEEEGRLHDMVLR
ENFFTRVYAYHDWHKMRHEGLTKHKLVKFHSRYKYLLMAHSPKWYRELGPIVANIEDIEATADCYFTGFMAALKINATRK
NHTSTLQHIQGYFKKHLTKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYLNPHPEELKLRYAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 8e-71 47
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 8e-71 47
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 6e-71 47
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 4e-71 47
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 5e-71 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SO_3386 NP_718940.1 bifunctional protein of unknown functions DUF523 and DUF1722 VFG0490 Protein 3e-71 47