|
Name : tnpA (SO_3360) Accession : NP_718914.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : ISSod5 transposase TnpA_ISSod5 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 3502200 - 3503405 bp Length : 1206 bp Strand : + Note : - DNA sequence : ATGACCACACCTACTTTTGATATCAATGCGGCCATTCAAGCACTACGTGAAGGTAAAGACCTCACCGGCAAGGATGGCAT CTTAACCCCTTTGATTAAGCAACTCACTGAAGCGGCCTTGGCGGCTGAGCTGGATGGCCACTTGGCGAGCACTGAAGGCG CCAATCGTAAGAATGGCAAAACCACTAAAACGGTTAAAAGCCCCCTTGGCAACTTCGAGTTGAACACACCCAGAGACAGG GCGGGCACCTTCGAACCTCAATTAGTCAAAAAGCACCAAACCCAACTTACCGATGAAATGGAGCGTAAAATCATTGGCTT ATTTTCATTAGGCTCCAGCTATCAAGATATTCGTGCGCATATCGAAGACATGTACGGCATGTCGGTGTCCAACGGCACGG TAAACGCCATTACTGACAAGTTACTCCCTGAGCTTCAAGCATGGCGGGAGCGCGAACTAGAGCCACTTTACCCCGTCATA TGGCTCGATGCGATTCACTATAAAATCAAAGAGAACGGTCGCTTTATTAGCAAAGCGGTTTACACCATTTTGGCGCTTAA CGTCGACGGTAAAAAAGAGCTATTAGGCTTATATCTGTCGGATAATGAAGGGGCTCACCATTGGTTAAGCGTGCTAACCG ACCTGTATAATCGCGGCGTTAAAGACATCCTCATCGCCTGCGTTGATGGCCTTAAAGGCTTTCCTGAAGCGATTGCAACC ATTTACCCGCAGACGGAAGTACAGTTGTGTGTCATCCACCAAATTCGCAACTCGATGAAGTATGTTGCCTCTAAGCATCA AAAGGCCTTTATGGCGGATTTAAAGTGCGTTTATAAGGCCGCCACCTTGAATGCGGCCGAGATGGCATTGGATGAGCTGG AGACGAAATGGGGTGATAAATACCCCGTGGTGATTAAGTCATGGCGCAACAAATGGGCACTGCTATCGGTGTATTTCAAA TACCCAGACTATGTCCGTACTGCCATCTACACCACCAATGCCGTTGAAGCGGTACATAGGCAATTCAGGAAGTTAACCAA AACGAAGGGCGGTTTTGCTAACGAGAACAGTTTACTCAAGCTGCTTTACGCAGGTATATTGAAGGCCTCTGAGCGCTGGA CTCACCCCATCCAAAACTGGAATTTGACGCTATCACAGCTCTCAATCCATTTTGAGGGGCGCTTAGAAAACCATATCGAC CTGTGA Protein sequence : MTTPTFDINAAIQALREGKDLTGKDGILTPLIKQLTEAALAAELDGHLASTEGANRKNGKTTKTVKSPLGNFELNTPRDR AGTFEPQLVKKHQTQLTDEMERKIIGLFSLGSSYQDIRAHIEDMYGMSVSNGTVNAITDKLLPELQAWRERELEPLYPVI WLDAIHYKIKENGRFISKAVYTILALNVDGKKELLGLYLSDNEGAHHWLSVLTDLYNRGVKDILIACVDGLKGFPEAIAT IYPQTEVQLCVIHQIRNSMKYVASKHQKAFMADLKCVYKAATLNAAEMALDELETKWGDKYPVVIKSWRNKWALLSVYFK YPDYVRTAIYTTNAVEAVHRQFRKLTKTKGGFANENSLLKLLYAGILKASERWTHPIQNWNLTLSQLSIHFEGRLENHID L |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 1e-88 | 47 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 5e-85 | 42 |
