Gene Information

Name : fliP (SO_3218)
Accession : NP_718773.2
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Virulence
Product : flagellar export protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3357862 - 3358608 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence : 
ATGATGAAGTACATACTCACTTTTATTGGGCTTAGTACACTGTTGTTTGTTACATCGGCAGGGGCGGCTGATGGTGTATT
ACCGGCTGTTACGGTAAAAACCGCTGCGGATGGCTCAACCGAATACTCAGTGACTATGCAGATATTACTGCTGATGACCT
CGCTGAGTTTTATACCCGCCATGGTCATTATGTTGACGTCCTTTACCCGCATCATTGTCGTGCTCTCCATTCTGCGCCAA
GCCATTGGTTTACAACAGACACCTTCTAACCAAGTGTTAATCGGTATGAGTCTGTTTATGACCTTTTTCATCATGGCGCC
CGTGTTCGACAAAATTTATGACCAAGGGGTAAAACCCTATATTGATGAACAACTCACTTTGCAACAGGCCTTCGATAAGG
GTAAAGAGCCATTACGGGCATTTATGTTGGGGCAAGTGCGTACCACAGATCTCAAAACCTTTATCGATATCTCTGGGTAC
CAGAATATTAATTCACCCGAAGAAGCACCAATGAGTGTGTTAGTGCCTGCATTTATCACCAGTGAGCTCAAAACGGCTTT
TCAAATTGGTTTTATGTTATTCGTGCCTTTTTTAGTGCTGGATTTAGTGGTGGCCAGTATCTTAATGGCCATGGGTATGA
TGATGCTCTCCCCTATGATTGTGTCATTACCCTTCAAGATCATGTTGTTTGTGCTTGTTGATGGTTGGGGACTTGTTATG
GGCACCTTAGCCAATAGCTTTGGTTAG

Protein sequence : 
MMKYILTFIGLSTLLFVTSAGAADGVLPAVTVKTAADGSTEYSVTMQILLLMTSLSFIPAMVIMLTSFTRIIVVLSILRQ
AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFDKGKEPLRAFMLGQVRTTDLKTFIDISGY
QNINSPEEAPMSVLVPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVM
GTLANSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-16 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-14 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-14 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-14 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP NP_718773.2 flagellar export protein FliP VFG1259 Protein 9e-58 67
fliP NP_718773.2 flagellar export protein FliP VFG2016 Protein 3e-50 59
fliP NP_718773.2 flagellar export protein FliP VFG2494 Protein 1e-50 58
fliP NP_718773.2 flagellar export protein FliP VFG2338 Protein 1e-47 53
fliP NP_718773.2 flagellar export protein FliP VFG0394 Protein 4e-17 41