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Name : wbpA (SO_3190) Accession : NP_718746.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Virulence Product : UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 3328156 - 3329436 bp Length : 1281 bp Strand : - Note : - DNA sequence : ATGATGTTTGATGTAGTAAATGCCAAAATTGGCATTATTGGTTTAGGCTATGTAGGATTGCCGCTAGCAGTTGAATTTGG TAAACAGCGTTTGACAATTGGGTTTGATATCAATCAAGCTCGAATCAATGAACTCAGTGCTGGCCACGATAGTACGTTAG AGTGTTCTGATACTGAGTTAGCTGAAGCAAAAAAACTAGTTTATACAACATCACTAGAAGCGCTCAAAGAATGTAATGTC TTTATTGTTACTGTTCCAACGCCGATTGATGAGCATAAGCAGCCTGATTTAACACCCTTGATCAAAGCTTCAGAAACCTT AGGTAAAGTCATCAAACACGGCGATGTAATCATCTATGAATCTACCGTTTACCCAGGTGCGACTGAAGAAGAATGTATCC CGGTTGTAGAGCAGGTATCAGGCCTTAAGTTTAATCAGGACTTTTTCGCGGGGTACTCGCCAGAGCGTATTAACCCTGGT GATAAAGAGCATCGTGTCACTAATATTTTAAAAGTGACTAGTGGATCCACGCCTGAAGTAGCTGAATATGTAGACCAGTT ATACAAATCTATTATTGTAGCTGGCACCCATAAGGCATCAAGTATCAAGGTGGCCGAAGCAGCTAAAGTGATTGAAAACA CTCAGCGAGATGTCAATATTGCGCTGATTAATGAGCTATCTATCATCTTTAACAAGCTTGGTATAGATACGCTTGAAGTG CTTGAAGCAGCTGGCACCAAGTGGAACTTTTTGCCATTTCGTCCTGGCTTGGTTGGTGGCCACTGTATCGGTGTAGATCC TTACTATTTAACTCATAAAGCGCAAAGCGTGGGTTATCACCCGGAGATGATCTTAGCCGGTCGCCGCCTTAACGACGGTA TGGGCCAGTATGTGGTGTCTCAATTGGTTAAGAAAATGCTTAAAAAGCGTATTCACGTAGAAGGCGCAAACGTTCTTGTG ATGGGCTTGACCTTTAAAGAAAACTGCCCGGATCTACGCAACACCAAAGTAGTGGATATTGTCCGTGAGCTTAAGGAATA CAATATTAATGTGGATATTGTTGACCCTTGGTGTGAAAGCCATGAAGCAGAACAAGAATATGGATTAACTTTGTGCGGTC AACCTAAAGTGAACCATTATGATGCGATTATTATAGCTGTTTCCCATAACGAGTTTCGTGCAATGGGCGCTGAGGCAATA CGTGCATTAGGTAAACCAGAACATGTGTTATACGACCTGAAATACGTGCTAAATAAAGAAAGTGTAGATATGCGTTTATA G Protein sequence : MMFDVVNAKIGIIGLGYVGLPLAVEFGKQRLTIGFDINQARINELSAGHDSTLECSDTELAEAKKLVYTTSLEALKECNV FIVTVPTPIDEHKQPDLTPLIKASETLGKVIKHGDVIIYESTVYPGATEEECIPVVEQVSGLKFNQDFFAGYSPERINPG DKEHRVTNILKVTSGSTPEVAEYVDQLYKSIIVAGTHKASSIKVAEAAKVIENTQRDVNIALINELSIIFNKLGIDTLEV LEAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSVGYHPEMILAGRRLNDGMGQYVVSQLVKKMLKKRIHVEGANVLV MGLTFKENCPDLRNTKVVDIVRELKEYNINVDIVDPWCESHEAEQEYGLTLCGQPKVNHYDAIIIAVSHNEFRAMGAEAI RALGKPEHVLYDLKYVLNKESVDMRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-141 | 66 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-141 | 66 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-112 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpA | NP_718746.1 | UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA | VFG0431 | Protein | 9e-142 | 66 |
