Gene Information

Name : wbpP (SO_3189)
Accession : NP_718745.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Virulence
Product : UDP-GlkcNAc C4 epimerase WbpP
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : 5.1.3.7
Position : 3327047 - 3328069 bp
Length : 1023 bp
Strand : -
Note : -

DNA sequence : 
ATGACACGTTACGAACAAATTAAACAAGAACTGCTAAATTCTCCCAAAACTTGGCTAATAACAGGTGTTGCAGGTTTTAT
CGGTTCAAATTTATTAGAACAATTGCTTAAATTAAATCAAACTGTTATTGGATTGGATAATTTTGCAACTGGCCGTCAAC
ATAATCTCGACGAAGTGCAATCACTTGTCACATCAGAACAATGGATGCGTTTTAGCTTCATAAATGGAGATATTCGCGAT
TATGCTATTTGTGAAGCTGTAGTAAATGGCGTTGATTATGTGCTTCATCAAGCTGCTCTGGGATCTGTACCACGCTCAAT
CGCTGATCCAATTACCACTAATGCTGCAAATATCACTGGCTTTCTTAACATGCTTCAAGCTGCAAAAGAGGCTGAAGTAA
AAAGCTTTACTTATGCTGCTTCCAGTTCAACTTATGGTGATCATCCTGCTTTGCCCAAAGTTGAACAGAATATTGGTAAT
CCGCTTTCTCCTTATGCTGTAACGAAATATGTGAATGAGCTCTATGCTAGTGTATATGCTCGTACTTATGGATTTGAAAC
GATAGGGTTAAGATATTTTAATGTGTTTGGTCGGCGTCAAGATCCTAATGGTGCCTATGCAGCCGTAATTCCTAAGTGGA
CATCTTCTATGATAAAAGGGGAAGACGTTTTTATTAATGGGGATGGCGAAACGAGTCGAGATTTTTGTTATATCGATAAC
GTAGTACAAATGAACATATTAGCTGCAACAGCAGCGTCAGAAGCTAAAAATGAAGTTTATAATGTCGCAGTTGGTGATAG
AACAACCTTGAATGATCTTTACTTTGCTATAAAGGATTCATTAAATGCGAATGGCATTAATGTTAATCAAAACCCAAACT
ATCGTGATTTTAGAGCTGGGGATGTGAGACATTCACAAGCTGATGTAAGTAAAGCCGTTACTAGACTAGGTTATCAATAT
ACACATAAGATACTTGAAGGTATCTCAGAAGCGATGCCTTGGTACAAGGAGTTTTTGGCATAA

Protein sequence : 
MTRYEQIKQELLNSPKTWLITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDIRD
YAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSFTYAASSSTYGDHPALPKVEQNIGN
PLSPYAVTKYVNELYASVYARTYGFETIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDN
VVQMNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQADVSKAVTRLGYQY
THKILEGISEAMPWYKEFLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 4e-109 65
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 4e-109 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpP NP_718745.1 UDP-GlkcNAc C4 epimerase WbpP VFG0430 Protein 2e-109 65