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Name : wbfY (SO_3171) Accession : NP_718727.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein epimerase/dehydratase-like WbfY Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3307625 - 3309565 bp Length : 1941 bp Strand : - Note : - DNA sequence : ATGGATTTTTTGCATTTTTTATTCTCATTAAAGCGGTCACAGAAGCGTTTGGTCAGCGTAGCGATAGACTCAGTTTTTTT GCTTTTTGCCTTTTGGTTTGCGTTGCTGGTGCGCTTGGACTCGGTAGATGTATTGTTTAAATCGCAATATTGGGGATTGA TTGTGTTAACTATCCCTATGAGTATTGCTGGGTTTATAAGGTTGGGGCTTTATCGCGCAGTGCTGCGTTATATTGGCTCG CAGGCATTTACTGCAATCGTGGCTGGTGTCGGTATTTCTACCATAGCTCTTGTTTTACTAGCCTATTATGGCGGGGTGGA TTTACCTCGCACAGTGCCATTTATCTATGCTGCTTTTGCTCTCGTTTTTGTGGGTGGCGCGCGCGCACTTATGCGTTCAT TAGTCGGTGCAGGTATTAACCGCCGTGGTGAGCCAGTTATTATTTACGGTGCGGGCGTGAGCGGACGGCAAACGGCGATT GCACTTGCACAAAGTCATGAATACCATCCGGTTGCTTTTGTTGATGATGACGAGAGTTTGCACAATACATCGATACAAGG CTTGCATGTTTATGCGTCGAATCAATTAAGTAAGCTTATAAAACAGCGACCTACAACTCGTGTTTTGCTGGCAATGCCGA GTGCATCACGTTCACGTCGTCAAGAAATTATTAATCAACTTGAGCCGCTTACTGTCAAGGTGATGACCTTGCCCGCCATG GCGGACTTAGTGAGTGGTGATAAGTTATTTAGTGATGTGAAAGAAGTCGAAATCGAAGATTTATTGGGTCGAGATTCTGT TGCGCCAAGACAACATTTATTGACTGCCAATATTAAAAACAAAGTAGTTATGGTTACTGGGGCTGGTGGTTCAATCGGTT CAGAGTTATGTCGCCAGATTTTAAAACAGCTACCTAAGCAGTTAGTTTTATTTGAGTTATCGGAGTTCGCACTTTATTCG ATTGAGCGTGAACTTTCTGCGACTGCCACTGAGCTGGGTATTGATGTTGAAATCGTCCCTATCATGGGCTCTGTACAACG TGAAAACCGTGTGCAAGCGGTGATGCAGGCGTTTAAAGTGCAGACGGTTTACCATGCCGCAGCCTATAAGCATGTGCCTT TAGTTGAGCATAACGTGGTTGAAGGTGTGCGCAATAACGTATTTGGTACTTTATATACCGCGAGAGCGGCCATTGCGGCA AAAGTAGAAACCTTTGTTTTGGTTTCAACTGATAAAGCAGTACGCCCTACAAATGTGATGGGTACCACTAAACGTATGGC AGAACTGGCATTGCAAGCATTAGCAAAAGAGAACCATCACACCCGTTTTTGCATGGTGCGTTTTGGTAATGTGCTGGGGT CTTCTGGTTCGGTTGTGCCATTATTTCGTAAACAGATTGCTAACGGCGGCCCAGTTACTGTTACTCACCCTGAAATCACG CGCTTTTTTATGACAATCCCTGAAGCATCACAGTTGGTTATTCAAGCAGGTGCTATGGGTAAGGGCGGTGATGTCTTTGT GCTTGATATGGGTAAATCGGTCAAAATCATTGATCTTGCAGCGAAAATGATCCGCTTAAGTGGTTATGATGTGAAGGATG AAGCGAACCCTAACGGTGATATCGCGATTGAATTTACTGGCCTTCGCCCCGGTGAAAAACTGTATGAAGAGTTACTGATT GGCGATGATGTAACTGGTACAGACCATGAGCGAATTATGACCGCGAATGAAATTTACCTGCCATGGGTTGAATTAGAGTT AATTCTTAATCGTTTGGATAAAGCATGCCATGAGTTTAACCATGAGGCTATTCGTGAGATTTTACTTGCGGCGCCTACCG GATTTGCCCCAACTGACGGTATTTGTGATCTAGTTTGGCAGCAAAGGAAATTATTTAAACCAGCTGATACAAAAGCGAAA GTGGTGACGTTAGTATCTTGA Protein sequence : MDFLHFLFSLKRSQKRLVSVAIDSVFLLFAFWFALLVRLDSVDVLFKSQYWGLIVLTIPMSIAGFIRLGLYRAVLRYIGS QAFTAIVAGVGISTIALVLLAYYGGVDLPRTVPFIYAAFALVFVGGARALMRSLVGAGINRRGEPVIIYGAGVSGRQTAI ALAQSHEYHPVAFVDDDESLHNTSIQGLHVYASNQLSKLIKQRPTTRVLLAMPSASRSRRQEIINQLEPLTVKVMTLPAM ADLVSGDKLFSDVKEVEIEDLLGRDSVAPRQHLLTANIKNKVVMVTGAGGSIGSELCRQILKQLPKQLVLFELSEFALYS IERELSATATELGIDVEIVPIMGSVQRENRVQAVMQAFKVQTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTARAAIAA KVETFVLVSTDKAVRPTNVMGTTKRMAELALQALAKENHHTRFCMVRFGNVLGSSGSVVPLFRKQIANGGPVTVTHPEIT RFFMTIPEASQLVIQAGAMGKGGDVFVLDMGKSVKIIDLAAKMIRLSGYDVKDEANPNGDIAIEFTGLRPGEKLYEELLI GDDVTGTDHERIMTANEIYLPWVELELILNRLDKACHEFNHEAIREILLAAPTGFAPTDGICDLVWQQRKLFKPADTKAK VVTLVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-82 | 47 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-86 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbfY | NP_718727.1 | polysaccharide biosynthesis protein epimerase/dehydratase-like WbfY | VFG0029 | Protein | 1e-125 | 51 |
| wbfY | NP_718727.1 | polysaccharide biosynthesis protein epimerase/dehydratase-like WbfY | VFG1300 | Protein | 5e-84 | 47 |
