Gene Information

Name : tnpA (SO_3039)
Accession : NP_718606.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Unknown
Product : ISSod16 transposase TnpA_ISSod16
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 3150802 - 3151833 bp
Length : 1032 bp
Strand : -
Note : -

DNA sequence :
ATGGCCATCTTACCACCACTTTGTCGCGCAGAGCGCAAACAACTACAGAAATTGCTCCATAAAACCAAGGATAAGCATTT
CGCCCGACGTCTTATCGCTATGCTGATGCTGCATCAAGGGCAGTCGATTACCGACGTTCATCATGCTACTGGTGCTGCAC
GCTCCAGTATTGGTCGTTGGTTAGCTTGGTACACCGAAAGCGGCGTTGATGGGCTTAAATCCCTGACGCTGGGACGGCCA
GCAATCTTACCCATAGACCCCATATTGCTCTGTCTATCTTTGCTTATTCAGCTATGCCCACAGGACTTTGGCTATCAACG
TAGCCGCTGGAGCAGCGAACTGCTTGCCATGGTGATTAATGCACAGCTTAAACTCAGCATCGCTGCATCAACCGTCCGTC
GATTACTACCCAAGGCGGGAATTGTCTGGCGCCGCTCAGCTCCGACATTGCGTATCAAAGACCCACACCAAGATGAGAAA
ATGGCCGAGATAAATCAGGCTCTTGAGCAGTGTTGCGTCGAACATCCGGTTTTCTATGAAGATGAAGTGGACATCGACTT
GAACCCAAAAATCGGGGCAGATTGGATGCCAAAAGGTCAGCAAAAACGCGTTGTCACCCCAGGCAACAACCGTAAGCATT
ACATAGCAGGAGCCCTGCATGCCAGCACCGGAAAAGTGCTTTATGTGAGCAGCGATAGCAAAGCGTCAGAGCTGTTTATT
GCCATGTTGGAGAAGCTTAAGCGTCATTACCGCAAAGCCAAAACCATCACGCTCATCCTAGACAATTACATTATTCATAA
GAGCCGTAAGACCGTTGCTTGGCTCAAGCACAACCCCAAATTCAGATTATTGTTTCAACCGGTATACTCGCCGTGGGTCA
ACAAGATAGAGCGCTTGTGGCTCGCACTGCATGAAACGGTAACCCGCAATCACGCTTGCAGGAACATGCGGGAACTGCTT
GGCATGGTATGGCATTTTATGGGAACCGTTTCCCCATTTCCTGGCTCCGGACACGGCACCGCGAAAATGTAG

Protein sequence :
MAILPPLCRAERKQLQKLLHKTKDKHFARRLIAMLMLHQGQSITDVHHATGAARSSIGRWLAWYTESGVDGLKSLTLGRP
AILPIDPILLCLSLLIQLCPQDFGYQRSRWSSELLAMVINAQLKLSIAASTVRRLLPKAGIVWRRSAPTLRIKDPHQDEK
MAEINQALEQCCVEHPVFYEDEVDIDLNPKIGADWMPKGQQKRVVTPGNNRKHYIAGALHASTGKVLYVSSDSKASELFI
AMLEKLKRHYRKAKTITLILDNYIIHKSRKTVAWLKHNPKFRLLFQPVYSPWVNKIERLWLALHETVTRNHACRNMRELL
GMVWHFMGTVSPFPGSGHGTAKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AFL65914.1 transposase Not tested SGI1-J6 Protein 4e-135 87
unnamed AAP70294.1 TnpA-like protein Not tested HPI Protein 2e-103 64
api42 CAF28516.1 DNA binding protein Not tested YAPI Protein 2e-81 61
Z4330 NP_289555.1 transposase Not tested OI-122 Protein 5e-72 59
unnamed AAL57563.1 putative transposase Not tested LEE Protein 4e-72 59
st46 CAC81884.1 ST46 protein Not tested LEE II Protein 4e-72 59
IS630-like CAI43817.1 putative transposase Not tested LEE Protein 4e-72 59