|
Name : tnpA (SO_2654) Accession : NP_718238.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : Mu phage transposase OrfA TnpA_MuSo2 Function : - COG functional category : - COG ID : - EC number : - Position : 2789446 - 2791455 bp Length : 2010 bp Strand : + Note : - DNA sequence : ATGTGGGTTACTGCAAAAGAGTGCGCTGGTCTAGCTGGTTTACCAACAGATCATAATAACGTCAGAACTAGACTATTTAA GATGGTTAAAGACCGTCCAGATATGTATAGAAAGCGCGAAGGTACCAAGGCTTTTGAATGGCATATAAGTGTTCTCCCGC TGCCTGTCCAAACCGCCATTTACAAACGTGAAGGCAAAATCCAATTGGGTGATCAGATCCTTGACTTACCCAAAAAGAAA CCGCAGCACAGCTATTGCCGTGATGCGCTGTGGGCTCGTTGGAACCAAAACCACGAAGACGCCCGCAACAAAGCCTTGCA AGCGCTGCGCGAAGTGCAAGCCGTGCATGCGCTTAAGCGTAACGGCATCAGCATGATGGATGCTTACACCTCAGTTTGCG AAGAATACGGCGTTGGCCTAAGCACTTTGCGCCGTCACTGCGCCATGGTTAAAGGCATTGATGAAGCAGATTGGGCGCCA GCCTTGTTGCCTAAGCACTTTGAAGTGGCCCAAGCCAAAAAGAAAAACCAATTTGCGTTTATTACACCCGAAGCCTGGGA AGCCTTTAAAACGGATTACCTACGTTTTGAGCAGCCCACTATGACGGTGTGCTATGAGCGCTTAAAAGAAATCGCCAAGG ATAAAGGTTGGGCTATCCCAAGCCTTAAAAGCCTAAGCCGCCGCATGGATTTTGAAGTGCCAGCACAGCAATTGGTGTTA TTGCGCCAAGGCGAGCATGCATTGCACCAGTTATACCCACCGCAAGAACGTAGCGTTGAAGATATGCATGCTATGCAGTG GATTAACGGCGACGGCTACCAACACAACGTATTTGTAAAATGGTTTAACGGCGAGATCCTACGCCCTAAAACATGGTTTT GGCAGGATGTATACAGCCGCAAAATTATCGGGTGGCGCTGTGATATTAGCGAAAACACAGACTCTATTCGCCTATCGCTT ATGGATGTGTTTAGCACCTATGGCATACCTCAAGAACTCACCATCGATAACACCCGCGCCGCGGCTAACAAATGGATGAC CGGAGGCGTAGCAAACCGCTATCGCTTTAAAGTGAAGGAAGATGATCCGTTGGGGCTTATCCCCATGATGGGTATCAAAC TGCATTGGTCGAGTGTGATCCTCGGTAAAGGCCACGGCCAAGCCAAGCCCATCGAACGCGCCTTTGGTGTGGGCGGGCTT GAAGAATATATCGACAAACACCCAAGCAACCACGGCGCTTATACGGGTTCAAACCCAACCGCCAAGCCAGACAACTACGG CAGCAAAGCCATTGATGCTGAGGTATTTATACAAACCATCGCCAAAGGCGTGGAGATGTATAACGCCAAAGTGGGCCGCA CTACCGAAGCTTGCAAAGGCTTTATGAGCTTTGATCAAGCCTTTGAGGCCAGCTATCAAACCGCTGAAATCCGCAAAGCG ACCAAGGCACAGCTTTACATGATGATGCTGCAAGCCGAGGCCGCGCTGGTATCTAAACACGGCACTTTAACCCTTGATGC AGGCGGCAGCATTAAAGGCCGTAAAAACCGCTATTACAACGAGCAGCTAATGAACTACGTCGGTAAAAAACTGGTCGCGC GTTTTGACCCGCAAAAGCTGCACGACTCTATCGAAGTTTATGCCCTTAACGGCGTCCATATTTGCACCGCCGAATGTATT GAGAAGGATGCCTTTAACGATACCCAATCCGCCCGTGAGACCAAGCGTAAGCGCACTCAGTTTGTCAAAAATAACAAACA GGCAGCAGAGGCCAAGCTCAGCGTGGATATGTTGGAACTGGCAGCGATGATGCGCCCAGCCGCCGAAGAAGTGATCCCCG AAACCAAAGTGGTGCAAATGGTTCGCCCTGCCAGCTTTGGCAATACCGCCGCAGCCGTGGCCTATGAAATTGAGCACGAA CCCGAAGCCGAACACCGCGCCCAATGCGCCGCCAACTTTAGCGAAAGCGTGGCGTTATTGAAGCAGCAACGGCTTAAAAA CCGACTTTAA Protein sequence : MWVTAKECAGLAGLPTDHNNVRTRLFKMVKDRPDMYRKREGTKAFEWHISVLPLPVQTAIYKREGKIQLGDQILDLPKKK PQHSYCRDALWARWNQNHEDARNKALQALREVQAVHALKRNGISMMDAYTSVCEEYGVGLSTLRRHCAMVKGIDEADWAP ALLPKHFEVAQAKKKNQFAFITPEAWEAFKTDYLRFEQPTMTVCYERLKEIAKDKGWAIPSLKSLSRRMDFEVPAQQLVL LRQGEHALHQLYPPQERSVEDMHAMQWINGDGYQHNVFVKWFNGEILRPKTWFWQDVYSRKIIGWRCDISENTDSIRLSL MDVFSTYGIPQELTIDNTRAAANKWMTGGVANRYRFKVKEDDPLGLIPMMGIKLHWSSVILGKGHGQAKPIERAFGVGGL EEYIDKHPSNHGAYTGSNPTAKPDNYGSKAIDAEVFIQTIAKGVEMYNAKVGRTTEACKGFMSFDQAFEASYQTAEIRKA TKAQLYMMMLQAEAALVSKHGTLTLDAGGSIKGRKNRYYNEQLMNYVGKKLVARFDPQKLHDSIEVYALNGVHICTAECI EKDAFNDTQSARETKRKRTQFVKNNKQAAEAKLSVDMLELAAMMRPAAEEVIPETKVVQMVRPASFGNTAAAVAYEIEHE PEAEHRAQCAANFSESVALLKQQRLKNRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAQ07470.1 | transposase | Not tested | Not named | Protein | 8e-127 | 51 |
