Gene Information

Name : tnpA (SO_4785)
Accession : YP_007001361.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Unknown
Product : ISSod23 transposase TnpA_ISSod23
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2714897 - 2715334 bp
Length : 438 bp
Strand : -
Note : -

DNA sequence :
ATGGGCGATTATAGAAGTTCATCACATGTTTATTGGCGTTGCAAATATCATATTGTTTGGACTCCGAAGTACCGTTTTAA
AATTTTAAAAGGAAACCTTGGTAAGGAGTTATACAGGTCAATTTATATCCTTTGCAATATGAAGGGTTGTGAGGCTTTAG
AATTAAACGTTCAGATCGACCACGTTCACTTGGTAGTCATAATCCCGCCGAAGCTGTCAGTATCAACGTTGATGGGAGTA
TTGAAAGGAAGAAGTGCGATAAGGCTATTCAATAAATTCCCTCATGTACGTAAAAAGCAATGGGGCAATAGCTTTTGGGC
CAGAGGTTATTTTGTAGATACAGTAGGTGTTAATGAAGAAATCATTAGACGATATGTGCGCCACCAAGATAAACAAGATC
AGGAACATGAGGCTCAATTGTCGTTGCAGATGATGTAG

Protein sequence :
MGDYRSSSHVYWRCKYHIVWTPKYRFKILKGNLGKELYRSIYILCNMKGCEALELNVQIDHVHLVVIIPPKLSVSTLMGV
LKGRSAIRLFNKFPHVRKKQWGNSFWARGYFVDTVGVNEEIIRRYVRHQDKQDQEHEAQLSLQMM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 2e-22 45
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 4e-22 42
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-18 42
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 2e-20 41
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 1e-20 41