|
Name : tnpA (SO_2392) Accession : NP_717982.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : ISSod4 transposase TnpA_ISSod4 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 2495736 - 2496938 bp Length : 1203 bp Strand : - Note : - DNA sequence : ATGACCCAACCTTTTAACTTCGAACAAGCCCTTAAAGATCTGCAATCAGGTAAAAGCCTCACAGGTAAAGACAGCATTCT TGGCCCACTGATCAAGCAACTCACTGAAGCCGCTCTCCAGGCTGAGCTTGAGCAGCATTTAGCGCATGATCCTCAGCCTA ATCGTAAAAATGGCAAAACCCCTAAGACCATTAAGCATCCGTCCGGTAACTTTGAGTTAGACGCGCCTAGAGACCGCAAT GGCACCTTTGAGCCTCAGTTGATTAAGAAAAATCAAACGACACTAACCGATGAAATCGAACGTAAAGTGTTATCGATGTT CAGTATAGGTATGAGCTATCGCGATATTAATCAACATGTTGAAGATATGTATGGGCTCAATGTGTCTAACGCAACAGTCA GTGCTATCACTGACAAACTCATCCCCGAACTTAAAGCGTGGCAACAGCGCCCATTAGATAGCCATTATCCTATCGTTTGG CTTGATGCGATACATTATAAAGTCAAAGAGGATGGGCGTTACGTCAGTAAAGCCGTTTACACATTGTTAGCGCTTAATAT GAAAGGAAAAAAGGAAATTTTAGGGCTTCACTTATCCGAAAATGAAGGCGCTAATTACTGGCTATCCGTACTGACCGATC TTAATAATCGTGGTGTAAAAGATATTCTTATCGCCTGTGTTGACGGCTTGACCGGTTTCCCTGAGGCCATAGCCAGTATC TTTCCTCATACGGAAACACAGCTATGCGTTATCCACCAGATCCGTAACTCAATGAAGTATGTCGCCTCAAAAAATCAGAA AGCGTTTATGGCTGATTTAAAGCCTGTGTATCGAGCCGTGAGTAAAGAAGCCGCAGAGATGGCATTGGACGAACTGGAGG CCAAATGGGGTGATGCTTATCCGCTGGTAATCAACTCTTGGCGTCGCAAATGGCATAATTTGTCCCATTATTTTAAGTAC CCAGAACATATCAGGAAAGTGATTTACACGACCAATGCGGTTGAGGCTGTACATCGCCAATTTAGAAAGCTCACCAAAAC CAAAGGTGCATTTCCTAATGAAAATAGCTTGTTGAAGCTACTTTACGCAGGCATATTAAACGCCTCAGATAAATGGACTA TGCCAATCCACAATTGGAGCCTTTGTTTATCTCAGTTAGCGATTTATTTTGAAGGACGTTTAGATAGCGTGCTAGAAATT TAA Protein sequence : MTQPFNFEQALKDLQSGKSLTGKDSILGPLIKQLTEAALQAELEQHLAHDPQPNRKNGKTPKTIKHPSGNFELDAPRDRN GTFEPQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHVEDMYGLNVSNATVSAITDKLIPELKAWQQRPLDSHYPIVW LDAIHYKVKEDGRYVSKAVYTLLALNMKGKKEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASI FPHTETQLCVIHQIRNSMKYVASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDAYPLVINSWRRKWHNLSHYFKY PEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKLLYAGILNASDKWTMPIHNWSLCLSQLAIYFEGRLDSVLEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 1e-82 | 49 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 1e-83 | 46 |
