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Name : tnpA (SO_2141) Accession : NP_717743.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : ISSod16 transposase TnpA_ISSod16 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3335 EC number : - Position : 2247107 - 2248138 bp Length : 1032 bp Strand : + Note : - DNA sequence : ATGGCCATCTTACCACCACTTTGTCGCGCAGAGCGCAAACAACTACAGAAATTGCTCCATAAAACCAAGGATAAGCATTT CGCCCGACGTCTTATCGCTATGCTGATGCTGCATCAAGGGCAGTCGATTACCGACGTTCATCATGCTACTGGTGCTGCAC GCTCCAGTATTGGTCGTTGGTTAGCTTGGTACACCGAAAGCGGCGTTGATGGGCTTAAATCCCTGACGCTGGGACGGCCA GCAATCTTACCCATAGACCCCATATTGCTCTGTCTATCTTTGCTTATTCAGCTATGCCCACAGGACTTTGGCTATCAACG TAGCCGCTGGAGCAGCGAACTGCTTGCCATGGTGATTAATGCACAGCTTAAACTCAGCATCGCTGCATCAACCGTCCATC GATTACTACCCAAGGCGGGAATTGTCTGGCGCCGCTCAGCTCCGACATTGCGTATCAAAGACCCACACCAAGATGAGAAA ATGGCCGAGATAAATCAGGCTCTTGAGCAGTGTTGCGTCGAACATCCGGTTTTCTATGAAGATGAAGTGGACATCGACTT GAACCCAAAAATCGGGGCAGATTGGATGCCAAAAGGTCAGCAAAAACGCGTTGTCACCCCAGGCAACAACCGTAAGCATT ACATAGCAGGAGCCCTGCATGCCAGCACCGGAAAAGTGCTTTATGTGAGCAGCGATAGCAAAGCGTCAGAGCTGTTTATT GCCATGTTGGAGAAGCTTAAGCGTCATTACCGCAAAGCCAAAACCATCACGCTCATCCTAGACAATTACATTATTCATAA GAGCCGTAAGACCGTTGCTTGGCTCAAGCACAACCCCAAATTCAGATTATTGTTTCAACCGGTATACTCGCCGTGGGTCA ACAAGATAGAGCGCTTGTGGCTCGCACTGCATGAAACGGTAACCCGCAATCACGCTTGCAGGAACATGCGGGAACTGCTT GGCATGGTATGGCATTTTATGGGAACCGTTTCCCCATTTCCTGGCTCCGGACACGGCACCGCGAAAATGTAG Protein sequence : MAILPPLCRAERKQLQKLLHKTKDKHFARRLIAMLMLHQGQSITDVHHATGAARSSIGRWLAWYTESGVDGLKSLTLGRP AILPIDPILLCLSLLIQLCPQDFGYQRSRWSSELLAMVINAQLKLSIAASTVHRLLPKAGIVWRRSAPTLRIKDPHQDEK MAEINQALEQCCVEHPVFYEDEVDIDLNPKIGADWMPKGQQKRVVTPGNNRKHYIAGALHASTGKVLYVSSDSKASELFI AMLEKLKRHYRKAKTITLILDNYIIHKSRKTVAWLKHNPKFRLLFQPVYSPWVNKIERLWLALHETVTRNHACRNMRELL GMVWHFMGTVSPFPGSGHGTAKM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | AFL65914.1 | transposase | Not tested | SGI1-J6 | Protein | 1e-134 | 87 |
| unnamed | AAP70294.1 | TnpA-like protein | Not tested | HPI | Protein | 4e-103 | 64 |
| api42 | CAF28516.1 | DNA binding protein | Not tested | YAPI | Protein | 6e-82 | 61 |
| Z4330 | NP_289555.1 | transposase | Not tested | OI-122 | Protein | 1e-71 | 58 |
| unnamed | AAL57563.1 | putative transposase | Not tested | LEE | Protein | 9e-72 | 58 |
| st46 | CAC81884.1 | ST46 protein | Not tested | LEE II | Protein | 9e-72 | 58 |
| IS630-like | CAI43817.1 | putative transposase | Not tested | LEE | Protein | 9e-72 | 58 |
