Gene Information

Name : qseB (SO_2104)
Accession : NP_717707.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Resistance
Product : AI-3-responsive two component signal transduction system response regulator QseB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2201573 - 2202232 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCATGTTAGTGGAAGATAATGAGTTACTGGCGCAAGGAATTTGCCTAAGCCTTGCTAAAATGGGCATGCAGGT
GGATCACTTAAGTAGTTATCATCAGGCGTTGGTGGGGATAAAAAATGAAACTTTTAGCGCCATTGTGCTCGATTTAGGTC
TTCCCGACGGAAATGGTAAAGACCTCCTCAAAGCATGGCGCTCGCAGGGTGTGTCTATTCCCACCATAGTGCTGACCGCG
AATACCGATTTTGATACCAAATTGGAGTGCCTCGATGTTGGCGCCGATGATTATTTAGGCAAACCCTTCGATGTGCGTGA
ATTAGCCGCGCGTATTAGAGCAATCGTGCGCCGTCAATTCGGTCTTGACCATAACAGCTTAAATATTGGCGCATTAAGTA
TCGATCTCAACACTCGAGAAGTGACTTTTCGTGATCAAAATGTGTCCCTCTCGCGACGGGAGTTTCAGCTATTACTGGAA
CTTGCTCAGTCCGCAGGCCGAGTGTTAACCCGTAATCAGTTAGAGCAACTCACCTATGGCTGGGATGAGGTGGGTAGTAA
TTCAATCGAAGTCCATATTCATCATTTACGTAAGAAATTAGCCAATGAGTTGATTAAGACGGTTCGCGGGATTGGTTATA
CTCTCACGGAAGTGAATTAG

Protein sequence : 
MRIMLVEDNELLAQGICLSLAKMGMQVDHLSSYHQALVGIKNETFSAIVLDLGLPDGNGKDLLKAWRSQGVSIPTIVLTA
NTDFDTKLECLDVGADDYLGKPFDVRELAARIRAIVRRQFGLDHNSLNIGALSIDLNTREVTFRDQNVSLSRREFQLLLE
LAQSAGRVLTRNQLEQLTYGWDEVGSNSIEVHIHHLRKKLANELIKTVRGIGYTLTEVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB NP_717707.1 AI-3-responsive two component signal transduction system response regulator QseB BAC0487 Protein 2e-34 44