Gene Information

Name : gspG (SO_0169)
Accession : NP_715811.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Virulence
Product : T2aSS secretion system pseudopilus protein GspG
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 177279 - 177713 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence : 
ATGCAAATGAACAAAAAGCACAAAGGTTTTACCTTACTCGAAGTGATGGTGGTGATTGTTATCCTCGGTATTTTGGCGTC
TATGGTGGTGCCAAACCTGATGGGCAACAAAGATAAAGCTGACCAACAAAAGGCGGTATCTGACATAGTCGCGCTCGAAA
ATGCCTTAGATATGTACAAGTTAGATAACGGTGTGTATCCAACGACTGAACAAGGTTTAGAGGCCTTAGTGCAAAAACCT
ACTATTTCACCCGAGCCACGTAATTACCGTGAAGAAGGTTATGTGAAGCGTTTACCGCAGGATCCATGGCGTAATAACTA
CTTACTGTTAAGCCCTGGCGAAAACAGCAAGTTAGATATCTTCAGCGCAGGCCCTGATAGTCAGCCAGGTACCGAAGACG
ATATCGGTAACTGGAACTTACAGAATTTCCAATAA

Protein sequence : 
MQMNKKHKGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNGVYPTTEQGLEALVQKP
TISPEPRNYREEGYVKRLPQDPWRNNYLLLSPGENSKLDIFSAGPDSQPGTEDDIGNWNLQNFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-44 68
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-44 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG NP_715811.1 T2aSS secretion system pseudopilus protein GspG VFG2050 Protein 3e-45 68
gspG NP_715811.1 T2aSS secretion system pseudopilus protein GspG VFG1871 Protein 1e-34 55
gspG NP_715811.1 T2aSS secretion system pseudopilus protein GspG VFG0180 Protein 1e-32 53