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Name : gspE (SO_0167) Accession : NP_715809.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Virulence Product : T2aSS secretion system assembly ATPase GspE Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 174412 - 175977 bp Length : 1566 bp Strand : + Note : - DNA sequence : ATGAGTGAAATACAAGTATCCCAAGTCGAGGATTTAAGCTTAGTTTCCAATGAACTAGGTCTTGAAGCCGAAGGTGATGA GGTATTTCGCTCCAGCAGCAAAGAGCGTTTACCTTTTGCCTTTGCCCATCGCCATCAGGTGATTTTAGCCTATGGCGATG ATGGTGCCTTGAACCTGTTTTATACCGCCCACACCCCATTAGCGGCTATGCTCGAGGCACGCCGCTATTCAGGGGTGGAT TTACCTTTGGTGTTGCTCGAGCCGAATAAGTTTGAGGTCAAACTCACTCAGGCATACCAAGCTAATTCCTCCGAAGCACA ACAGCTGATGGAAGATATTGGCAACGAGATGGATTTATTCACCCTCGCTGAAGAGTTGCCACAAACCGAGGACCTGCTCG AAGGTGACGATGATGCCCCGATCATTAAGCTGATTAACGCCTTGTTATCTGAGGCGATTAAAGAAGAAGCCTCGGATATT CATATCGAAACCTATGAGAAACAACTGGTGGTGCGATTCCGCATCGACGGTGTGCTCAAAGAAGTGCTCAAGCCAAACCG TAAACTGTCATCTTTATTGGTGTCGCGGATTAAGGTTATGGCGCGCCTCGATATCGCCGAGAAGCGTGTTCCCCAGGACG GCCGTATTTCGCTGCGGATTGCGGGCCGCGCGGTGGACGTGCGGGTATCGACCATGCCATCGAGCCACGGTGAACGGGTG GTGCTGCGTTTACTCGATAAAAACGCCGGTAATCTGGATTTAAAACAACTGGGTATGACGGACAGTATCCGAGCCAAGTT CGATGAGCTTATTCGTCGTCCCCACGGTATTATCTTGGTAACCGGTCCTACGGGTTCGGGTAAGAGTACCACGCTGTATG CCGGGCTTACTGAGATTAACTCTAAAGATACCAATATCTTAACTGTTGAAGATCCCATCGAATACGAGTTAGAAGGCATC GGCCAAACTCAAGTTAACACTAAGGCGGATATGACCTTTGCCCGTGGTCTACGGGCGATTTTGCGTCAAGACCCCGATGT GGTGATGATTGGGGAAATCCGTGACCTTGAAACTGCGCAAATTGCGGTGCAGGCATCTTTGACTGGCCACTTAGTGATTT CGACTCTTCACACTAACACCGCTTCGGGCGCGATTACCCGTTTGCAGGACATGGGTGTTGAGCCATTTTTGGTGTCATCG AGCTTGCTCGGCGTATTGGCCCAGCGTTTAATCCGTACCCTCTGTCCAAAATGTAAGACAGAGCATACGCCCGATGAACG TGAACGTGAGCTACTTGGGATTACTGCTGATGATCCACGCCATATTTATCGTGCCAACGGCTGTAAAGCCTGTGGCGGTA GTGGTTACCGTGGTCGTACCGGCATCCACGAGCTATTGCTTGTCGATGATAATGTGCGCGAGCTTATTCACGGTGGCCGT GGCGAACTGGCGATTGAGAAATATATCCGTCAGTCGGTACCGAGTATTCGCCATGATGGCATGAGTAAAGTGCTTTTAGG TATCACTACTCTGGAAGAAGTCTTGAGGGTGACCCGCGAGGAGTAA Protein sequence : MSEIQVSQVEDLSLVSNELGLEAEGDEVFRSSSKERLPFAFAHRHQVILAYGDDGALNLFYTAHTPLAAMLEARRYSGVD LPLVLLEPNKFEVKLTQAYQANSSEAQQLMEDIGNEMDLFTLAEELPQTEDLLEGDDDAPIIKLINALLSEAIKEEASDI HIETYEKQLVVRFRIDGVLKEVLKPNRKLSSLLVSRIKVMARLDIAEKRVPQDGRISLRIAGRAVDVRVSTMPSSHGERV VLRLLDKNAGNLDLKQLGMTDSIRAKFDELIRRPHGIILVTGPTGSGKSTTLYAGLTEINSKDTNILTVEDPIEYELEGI GQTQVNTKADMTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVISTLHTNTASGAITRLQDMGVEPFLVSS SLLGVLAQRLIRTLCPKCKTEHTPDERERELLGITADDPRHIYRANGCKACGGSGYRGRTGIHELLLVDDNVRELIHGGR GELAIEKYIRQSVPSIRHDGMSKVLLGITTLEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-152 | 63 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-152 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | NP_715809.1 | T2aSS secretion system assembly ATPase GspE | VFG0182 | Protein | 9e-152 | 65 |
| gspE | NP_715809.1 | T2aSS secretion system assembly ATPase GspE | VFG2048 | Protein | 3e-152 | 63 |
| gspE | NP_715809.1 | T2aSS secretion system assembly ATPase GspE | VFG1876 | Protein | 2e-136 | 57 |
| gspE | NP_715809.1 | T2aSS secretion system assembly ATPase GspE | VFG2426 | Protein | 7e-79 | 47 |
| gspE | NP_715809.1 | T2aSS secretion system assembly ATPase GspE | VFG1880 | Protein | 2e-85 | 42 |
| gspE | NP_715809.1 | T2aSS secretion system assembly ATPase GspE | VFG0112 | Protein | 2e-84 | 42 |
