Gene Information

Name : rdgC (SO_1556)
Accession : NP_717169.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Unknown
Product : putative exonuclease RdgC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 1632127 - 1633041 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence :
ATGTGGTTTAAAAATCTTACTCTTTATCGTTTCAATAAACCTTTTTCCATCGAGACAGAAGCACTTGAAACCGCACTTGC
CGATTTCACATTTTCTCCGTGCGGCAGCCAAGATGTCAGCAAATTTGGTTTTTCGAATGCCTTAGGTAAAAAAGGTAGCA
CCTTAGTACACAGCGCCAATAATCGTCATCTAATCTGTGTCACTAAAGAAGAAAAAATTCTGCCTGCTCAAGTGATTAAA
GAGTCGTTAGAAGAAAAAGTGGCGCAAATTGAAGACGAAGAAAATCGCAAACTTGCCAAAAAAGAAAAAGATGCCTTAAA
AGATGAGATCATCACCAGCTTATTGCCGCGCGCCTTTTCACGCCGTAGCCAAACGCGCGCACTGATTTTACCCGAGCTTG
AAATGATCCTCGTCGATAGCTCCAGCGCCACTAAAGCCGAAGAGTTATTAGCCTTACTACGTAAGGCATTAGGCAGCTTG
CCCGTGATCCCATTAAGCTTTAAAGCGCCGATTGAAAGCCAATTAACTGAATGGCTTAAAAATGGCAGTGCGCCCTTACC
TTTTGAAATGCAAGATGAAGCCGAGCTGAAATCAGCTGCGGATGAAGGCGGTATAGTACGCTTTAAGCAACAAGATCTTA
AAGAAGATGAAGTGCTAGCTCACCTAGAAACCGGCAAAGAAGTGCATAAATTAGCGCTACACTTTGGCCAATCCATTGCG
CTCTTATTGCAATCCGATGCCAGCGTGAAACGCTTAAAATTCTCCGAAGAATTTAGAGCGGGCAACGATGAACTCGGCAA
TGAAGATCCTATGGCGCGTCTCGATGCCGACTTCGCCTTAATGGGCAGTGAATTAGTTGCCCTAATGCACGCCTTAGTGT
CAGCATTAGGCGGCATTGAAGAGACTCAGGCTTAA

Protein sequence :
MWFKNLTLYRFNKPFSIETEALETALADFTFSPCGSQDVSKFGFSNALGKKGSTLVHSANNRHLICVTKEEKILPAQVIK
ESLEEKVAQIEDEENRKLAKKEKDALKDEIITSLLPRAFSRRSQTRALILPELEMILVDSSSATKAEELLALLRKALGSL
PVIPLSFKAPIESQLTEWLKNGSAPLPFEMQDEAELKSAADEGGIVRFKQQDLKEDEVLAHLETGKEVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDELGNEDPMARLDADFALMGSELVALMHALVSALGGIEETQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 8e-51 46