Gene Information

Name : alpA (SO_4821)
Accession : YP_007001340.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Virulence
Product : Mu phage lytic protein AlpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1504689 - 1504901 bp
Length : 213 bp
Strand : +
Note : -

DNA sequence :
ATGAACACAACTCTCACAAGCAATTCCATTATTAGACTGAAGACCTTGGTTCAGCTTACAGGGCTTTCGCGTTCAACTAT
CTACGATAAACTCAATCCCAAATCCCCCAGGTTTGATCCACTTTTTCCGCGAAAAGTTTGTCTTGGCGCTCGTGCCGTAG
GCTGGTACATGCAAGAAGTCGAACAGTGGCTGCAAGGTAGAAGATTTTGCTGA

Protein sequence :
MNTTLTSNSIIRLKTLVQLTGLSRSTIYDKLNPKSPRFDPLFPRKVCLGARAVGWYMQEVEQWLQGRRFC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 1e-07 44
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 9e-07 42
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 9e-07 42
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 6e-07 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alpA YP_007001340.1 Mu phage lytic protein AlpA VFG1118 Protein 3e-07 42