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Name : serS (LA_4339) Accession : NP_714519.1 Strain : Genome accession: NC_004342 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 4318836 - 4320089 bp Length : 1254 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATTTGCGTTATATCACTGAAAATACAGAAGATCTCAAAAAAGTTTTAGAACTCAGAGGTTTTAAAGAAATTGG AATCATTGACGAACTCAAATCGATTATTCAAAGAAAACGTGAATTTCAAAAAGAAGCAGATATTCTTAGAGAGGAACGTA ACAAAGCTAGTAAAGAAGTTGGGAAAATTAAACAGTCTGGCGGAGATATTACGAAAATTTCTGCTTCTGTGAAACTCGTT GGCGAAAAAATAAAAGAAATAGAATCCAAACTTGAACAAGAAGAAAACGCTCTTTTAAATATTAATTTAGGGCTTCCTAA TATTCTGGATCCAAAGGTCCCGCCGGGAAAATCAGAACATGATAATATTGTTCAGTACGAAGTAGGAAAAATTCCTACTT TTCAGTTTGTTCCAAAAACTCATTTTGAAATCGGAGAGGCATTACACTGGATCGATTTTGAAAAAGGGGTAAAACTTTCC GGAGCAAGGGCTTATACTTATTGGAAAGACGGCGCGAGACTAGAAAGAGCTTTGATGAATTTTATGTTAGACGTTCATAC TAAGGAACATGATTATACGGAAGTTTGGGTGCCTTCGATGGTTAACGACGAATCTATGATGGCGACCGGACAGTATCCTA AATTTAAGGATGAATTTTATAGAATCGATAAGGATGAACTCAATTTAATTCCTACCGCAGAAGTTCCCCTTACAAATTTG TATAGAGACGAGATCATCCCGGAAGATCAACTTCCGATTTCCGTAACGGCACATACGTCTTGTTTTAGAAGAGAAGCGGG ATCTTACGGTAAAGATACGCGAGGACTGGTTCGGGTTCATCAGTTTCAGAAAGTTGAACTCGTAAAGTTTTGTAAACCTG AGGATTCAGAAGAAGAACATAAAAAAATGCTTTCTCATGCGGAGAATATTCTGAAAAAATTAGAACTTCCATATCGGGTT ATTATTCTTTGTTCGGGAGATATTTCCGCAAATTCTTCGATCACTTATGATATAGAAGTCTGGATGCCCGGTTTGAATCG ATATATGGAAATTTCGTCTGTATCCAATTTTCGTGATTTTCAGGCGAGAAGGGGAAAAATTCGTTATAAATCCAAAGATG GTAAGAATCAACTCGTACATACGATCAATGGTTCTGGTCTTGCACTGGGAAGAACGTACGCTGCGATTTTGGAAAATTTT CAAAATGAAGATGGAACACTTCGTATTCCAGAAGTTTTAAAATCTTATTTTTAA Protein sequence : MLDLRYITENTEDLKKVLELRGFKEIGIIDELKSIIQRKREFQKEADILREERNKASKEVGKIKQSGGDITKISASVKLV GEKIKEIESKLEQEENALLNINLGLPNILDPKVPPGKSEHDNIVQYEVGKIPTFQFVPKTHFEIGEALHWIDFEKGVKLS GARAYTYWKDGARLERALMNFMLDVHTKEHDYTEVWVPSMVNDESMMATGQYPKFKDEFYRIDKDELNLIPTAEVPLTNL YRDEIIPEDQLPISVTAHTSCFRREAGSYGKDTRGLVRVHQFQKVELVKFCKPEDSEEEHKKMLSHAENILKKLELPYRV IILCSGDISANSSITYDIEVWMPGLNRYMEISSVSNFRDFQARRGKIRYKSKDGKNQLVHTINGSGLALGRTYAAILENF QNEDGTLRIPEVLKSYF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-83 | 49 |
