Name : gspE (LA_2374) Accession : NP_712555.1 Strain : Genome accession: NC_004342 Putative virulence/resistance : Virulence Product : type II secretory pathway ATPase protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2348066 - 2349739 bp Length : 1674 bp Strand : - Note : - DNA sequence : TTGAAAACTCTCGGAGATATCCTAATCGAAGAGGGGATCATATCTGAAAAAGATCTGGAAGATTCCCTAAAGGTTCAGAA AAAAAACAACCTTCCACTCAGTCATATCATTCAGAAAAAAGGAATCGCCGGAGAAGCAGATATTCTCCGCGCCCTATCCA AACTCTATCAACTCGAGTTCAGAGAAAAGTTAGAGTTTACGGGTATGGAAGAAATATTTTTACAAATTCCTCTAAAACTC ATTCAGAAAAGTAGAATCGTTCCGTTTTCTCTTTCTAAAAAAACAATTCGAATTGCTGTATCCGATCCTTCTGATTTACA TCCGATGGATGACGCTCGTAACTTTCTAAAAGGTTACAACGTGGAATTTATTCTCGCTCCGGAACCGGAGATCATGAGAA TTATTCATTCTCATTTTGATAATACATCTTCTGCCGCCAAAGAGATGTTAAATGAGATGGAGGGAAGTTTTTCCGAACTT GCGGAAGCCTTTGAAAATGAAACCCTGGATCTAAGCGATGACGCTCCGATCATCAAAATGGTCAACGTGATCCTTTCCCA AGCGGTCAACGAAAGGGCTTCGGATATTCACATTGAACCTTACGAAAAGTCTCTCGTGGTTCGCTATCGTGTGGATGGTA TTTTGCATAACGTGCTTAGTCCTCCTAAATCGTATCACGCGGGTATTTCTTCCAGAATCAAGATCATGTCTAATTTGAAC ATCGCTGAAAATAGACTTCCTCAAGACGGAAGGATCAAACTTAGATTGGCTGGTAAGGATATAGATATCCGGGTTTCCAC CATTCCTTGTCAGTTCGGAGAACGGATCGTAATGAGGCTTTTGAATAAAACGGATCAAAAGTATTCTTTAGATACGATGG GTTTTTATCCAGAATTAATCCAGTCTTTGCGTTCGTTAATTTACGAACCTCATGGAATCATTTTAGTAACGGGACCGACC GGATCGGGTAAGTCTACTACATTATATTCTGCGTTAAGCGAACTCAATACAGAAGAAAGAAACATCATCACCTGCGAAGA TCCTGTGGAATATCAGATTGAAGGAATTTCTCAAATGCAAATGCAGGAAAAAATTGGTCTTACGTTTGCAACCGGACTTC GAGCCATCCTTCGACAAGACCCGGACGTTATCATGGTAGGTGAGATTCGAGATGAAGAAACCGCAAGAATCGCGATCCAA GCTTCTCTGACCGGTCACCTTGTTTTTTCTACGCTTCACACAAACGATGCAGCAAGTGCCGCGACTCGTTTGATCGATAT GGGAATCGAGCCCTATCTGATTACTTCCACAGTATTAGGATTTATGGCTCAAAGACTTGTAAGAGTTATCTGCACTCAAT GTAAAGAAACGTATAAACCTACCACTTCGGAACTAGAGTCCATTGGCATCTCTAAAAAATTTTTAAAGAACGGTAACTTA CATCGTGGTAAAGGTTGTTCTCATTGTATGGGAACTGGTTTTAAAGGTAGAATCGGAATTTATGAACTTTTACTTGTAAA TTCTCCTCTCAAACAAGCAATTCTTCATGGTAAAGACGCTGGACAGTTAAACGAAATCGCTCTCGAGCATGGGTTTCGAA CTCTTAAAGATTACGGAATTAGAAAGGTAGTTGATGGTGTAACTACAATCGACGAAGTTCTCAGGGTAACTTAA Protein sequence : MKTLGDILIEEGIISEKDLEDSLKVQKKNNLPLSHIIQKKGIAGEADILRALSKLYQLEFREKLEFTGMEEIFLQIPLKL IQKSRIVPFSLSKKTIRIAVSDPSDLHPMDDARNFLKGYNVEFILAPEPEIMRIIHSHFDNTSSAAKEMLNEMEGSFSEL AEAFENETLDLSDDAPIIKMVNVILSQAVNERASDIHIEPYEKSLVVRYRVDGILHNVLSPPKSYHAGISSRIKIMSNLN IAENRLPQDGRIKLRLAGKDIDIRVSTIPCQFGERIVMRLLNKTDQKYSLDTMGFYPELIQSLRSLIYEPHGIILVTGPT GSGKSTTLYSALSELNTEERNIITCEDPVEYQIEGISQMQMQEKIGLTFATGLRAILRQDPDVIMVGEIRDEETARIAIQ ASLTGHLVFSTLHTNDAASAATRLIDMGIEPYLITSTVLGFMAQRLVRVICTQCKETYKPTTSELESIGISKKFLKNGNL HRGKGCSHCMGTGFKGRIGIYELLLVNSPLKQAILHGKDAGQLNEIALEHGFRTLKDYGIRKVVDGVTTIDEVLRVT |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-108 | 48 |
gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-108 | 48 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
gspE | NP_712555.1 | type II secretory pathway ATPase protein E | VFG2048 | Protein | 4e-108 | 48 |
gspE | NP_712555.1 | type II secretory pathway ATPase protein E | VFG0182 | Protein | 9e-107 | 48 |
gspE | NP_712555.1 | type II secretory pathway ATPase protein E | VFG1876 | Protein | 8e-95 | 45 |
gspE | NP_712555.1 | type II secretory pathway ATPase protein E | VFG1880 | Protein | 3e-84 | 44 |