Gene Information

Name : insB (SF0833)
Accession : NP_706759.2
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Unknown
Product : IS1 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 866637 - 867140 bp
Length : 504 bp
Strand : -
Note : Code: L; COG: COG1662

DNA sequence : 
ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGTGCTAAAT
CACGTCAGCGCTGGCTGTTTTACGCGTGTGACAGGATACGGAGGACGGCTGTGGCGCACGTCTTCGGGGAACGCACTCTG
GCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGA
ATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGAC
AACATCTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTAT
CTGAACATAAAACACTATCAGTAA

Protein sequence : 
MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYACDRIRRTAVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-66 99
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 3e-66 99
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 1e-66 99
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 1e-66 99
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 4e-51 98
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 4e-66 97
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 4e-48 97
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 1e-62 92
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 2e-62 89
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 2e-62 89
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 2e-62 89
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 1e-59 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insB NP_706759.2 IS1 ORF2 VFG0612 Protein 1e-66 97