Gene Information

Name : SF0476 (SF0476)
Accession : -
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 492546 - 493214 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence :
TTGTTACGGGAAGGTATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCG
GGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAAC
GACCTGACCAGCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCGGGGCTTCGTCTATGTGGCGTTCATCATTGAT
GTGTTTGCCGGATACATCGTGGGGTGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGC
GTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGC
GGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAAT
GGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTAACGTGGGT
GGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCACATCCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTT
CCATCGGAAACGATGATCTGGCAGCCTGA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC AAD44736.1 TnpC Not tested SHI-2 DNA 0.0 100
SF3705 - - Not tested SHI-2 DNA 0.0 99.9
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 DNA 0.0 99.8
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 DNA 0.0 99.4
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 DNA 0.0 99.1
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 DNA 0.0 99.1
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 DNA 0.0 96.4
IS629 CAC37926.1 transposase for IS629 Not tested LEE DNA 0.0 96
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE DNA 0.0 96
IS629 CAI43821.1 transposase for IS629 Not tested LEE DNA 0.0 96
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 DNA 0.0 95.8
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE DNA 0.0 95.7
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE DNA 0.0 95.7
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE DNA 0.0 95.5
unnamed - - Not tested LEE DNA 0.0 94.8
ECO103_3580 - - Not tested LEE DNA 0.0 94.8
unnamed - - Not tested LEE DNA e-278 94.7
ECO103_3568 - - Not tested LEE DNA e-278 94.7
Z1221 NP_286756.1 transposase Not tested TAI DNA 0.0 94.3
Z1660 NP_287162.1 transposase for IS629 Not tested TAI DNA 0.0 94.3
Z1198 NP_286733.1 transposase Not tested TAI DNA 0.0 94.3
Z1638 NP_287141.1 transposase Not tested TAI DNA 0.0 94.3
IS629 CAI43840.1 transposase for IS629 Not tested LEE DNA 0.0 94
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 DNA 0.0 93.9
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 DNA 0.0 93.9
ECUMN_3342 - - Not tested Not named DNA e-264 92.9
c3594 NP_755469.1 transposase Not tested PAI I CFT073 DNA e-264 92.9
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 DNA 0.0 92.4