Gene Information

Name : sfmC (SF0462)
Accession : NP_706409.1
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein FimC
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 477495 - 478187 bp
Length : 693 bp
Strand : +
Note : Code: N; COG: COG3121

DNA sequence : 
ATGATGACTAAAATAAAGTTATTGATGCTCATGATATTTTATTTAATCATTTCGGCCAGCGCCCATGCTGCCGGAGGGAT
CGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAAAAATAGCCATACCAATG
AGCTCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTATTT
GTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCGGCAGATCGTGAGTCTCTGTT
CTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTAT
CGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGA
TCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTCGTTAACCTGCAAGTGGGCAGCCAAAAGTT
GGGGAATGCTATGGCGGCACCCAGAGTTAGTTCACAAATTCCCTTACCCTCAGGAGTGCAGGGAAAGCTGAAATTTCAGA
CCGTTAATGATTATGGTTCAGTAACCCCGGTCAGAGAAGTGAACTTAAACTAA

Protein sequence : 
MMTKIKLLMLMIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIKNSHTNELFLVNSWIENSSGVKEKSFIITPPLF
VSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR
SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVSSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 6e-43 46
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sfmC NP_706409.1 fimbrial chaperone protein FimC VFG0445 Protein 2e-63 64
sfmC NP_706409.1 fimbrial chaperone protein FimC VFG0875 Protein 5e-44 49
sfmC NP_706409.1 fimbrial chaperone protein FimC VFG1644 Protein 6e-38 45
sfmC NP_706409.1 fimbrial chaperone protein FimC VFG0911 Protein 1e-37 45