Gene Information

Name : hpaD (SF4382)
Accession : NP_710091.1
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Unknown
Product : homoprotocatechuate dyoxygenase
Function : -
COG functional category : S : Function unknown
COG ID : COG3384
EC number : -
Position : 4553502 - 4554353 bp
Length : 852 bp
Strand : -
Note : Code: S; COG: COG3384

DNA sequence :
ATGGGTAAGTTAGCGTTAGCCGCCAAGATCACGCACGTACCGTCGATGTATCTCTCTGAACTACCAGGAAAAAACCACGG
TTGTCGCCAGGGTGCGATCGACGGGCATAAAGAGATCAGCAAGCGTTGCCGGGAAATGGGCGTCGATACCATTATCGTTT
TCGATACTCACTGGCTGGTCAACAGTGCTTATCACATCAACTGTGCAGACCATTTTGAAGGCGTCTACACCAGCAACGAG
CTGCCGCATTTTATTCGCGACATGACCTACAACTACGAGGGCAACCCGGAGTTGGGGCAGCTAATTGCCGAGGAAGCCTT
AAAGCTCGGCGTGCGGGCAAAAGCGCACAATATTCCCAGCCTGAAACTGGAATACGGCACGCTGGTACCGATGCGCTACA
TGAATGAAGACAAGCACTTCAAAGTGGTCTCCATTTCGGCTTTCTGCACGGTTCACGATTTTGCCGACAGCCGCAAGCTG
GGCGAAGCGATTCTGAAAGCGATCGAACAGTACGACGGCACCGTGGCGGTCCTTGCCAGCGGTTCGTTATCGCACCGCTT
TATTGACGATCAGCGTGCGGAAGAAGGGATGAACAGCTACACCCGCGAGTTCGACCGCCAGATGGACGAGCGTGTGGTGA
AGCTGTGGCGCGAAGGCCAGTTCAAAGAGTTTTGCAATATGCTGCCGGAGTACGCCGACTACTGCTACGGCGAAGGCAAT
ATGCACGACACGGTGATGCTGCTGGGGATGCTCGGCTGGGATAAATACGACGGCAAGGTGGAGTTTATTACCGAGCTGTT
CCCAAGCTCTGGCACCGGTCAGGTTAACGCTGTTTTCCCGCTGCCCGCGTAA

Protein sequence :
MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCREMGVDTIIVFDTHWLVNSAYHINCADHFEGVYTSNE
LPHFIRDMTYNYEGNPELGQLIAEEALKLGVRAKAHNIPSLKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKL
GEAILKAIEQYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWREGQFKEFCNMLPEYADYCYGEGN
MHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVNAVFPLPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaD AAO17180.1 HpaD Not tested tcd island Protein 4e-126 90