Gene Information

Name : insB (SF4288)
Accession : NP_709999.1
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Unknown
Product : IS1 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 4465412 - 4465807 bp
Length : 396 bp
Strand : +
Note : Code: L; COG: COG1662

DNA sequence : 
GTGATTGTCTGCGCTGAAATGGACGAACATTGGGGTTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTA
TGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTGGCCGCACTGGAGCGTCTTCTGAGCCTGC
TGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTT
ATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGTACGGAAGTC
ACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAA

Protein sequence : 
MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLAALERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHV
ISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHDKVIGHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 5e-50 99
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 9e-50 99
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 6e-50 99
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 6e-49 97
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 6e-49 97
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-49 97
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 1e-48 96
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 1e-48 91
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 1e-48 91
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 1e-48 91
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 5e-46 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insB NP_709999.1 IS1 ORF2 VFG0612 Protein 5e-50 97