Gene Information

Name : SF0374 (SF0374)
Accession : NP_706323.1
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Unknown
Product : ISSfl4 ORF3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 384845 - 385651 bp
Length : 807 bp
Strand : -
Note : -

DNA sequence : 
GTGCACGCAGATGACACTCCGGTGAAAGTACTGGCCCCGGGGAACGGAAAGACGAAAACGGGTCGTCTGTGGGTATACGT
CAGGGATGATCGTAATGCGGGTTCATCCCTGCCGGCAGCCGTCTGGTTCGCGTATTCGGCAGATCGCAAAGGAGAACATC
CGCAGCTCCACCTGGCAAAGTATCAGGGCGTACTGCAGGCTGATGCCTATGCAGGTTATAACGTACTGTACGAAACGGGC
CGGGTGAAGGAAGCCGGGTGCCTGGCCCACGCCCGCCGAAAAATCCATGACGAGGATGTGCGCCGTCCGACAGAAATGAC
TCAGGAAGCGCTCAGACGGATAGCAGAGTTATACGACATAGAAGCGGAGATACGTGGCAGTCCGGCAGAGGAACGGCTTG
CAGTCAGAAAAGCCAGAAGCGTCCAGTTGATGCAGTCGTTGTACGACTGGATACAGTTGCAGAGGAAAACGCTGTCGAAA
CATGCGGAGATGGCGAAGGCGTTCGACTATATCCTGAATCACTGGAATGCGCTGAACGAGTTCTGTCGTGACGGCCGGGT
GGAAATAGACAACAACATCGGTGAAAACGCGTTACGATCGGTGGCGGTTGGAAGAAAAAATTATCTCTTTTTCGGCTCAG
ACAAGGGAGGAGAAAGTGCGGCGATCATCTACAGTCTGCTGGTCACCTGCAAACAGAACGAAGTGGAGCCGGAGGACTGG
TTGCGCGAAGTGATCGAGAAGCTCAATGACTGGCCGTCGAACCAAGTGCATGAACTGCTGCCCTGGAACTTCTCGTCTGT
AAAATAA

Protein sequence : 
MHADDTPVKVLAPGNGKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADAYAGYNVLYETG
RVKEAGCLAHARRKIHDEDVRRPTEMTQEALRRIAELYDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQRKTLSK
HAEMAKAFDYILNHWNALNEFCRDGRVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDW
LREVIEKLNDWPSNQVHELLPWNFSSVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2972 NP_708746.1 hypothetical protein Not tested SHI-1 Protein 2e-84 67
unnamed AAK00463.1 unknown Not tested SHI-1 Protein 1e-84 67
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-80 66
Z4314 NP_289540.2 hypothetical protein Not tested OI-122 Protein 2e-55 58
unnamed AAL67373.1 unknown Not tested PAI II CFT073 Protein 5e-51 57
unnamed AAL67335.1 L0015-like protein Not tested PAI II CFT073 Protein 9e-54 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SF0374 NP_706323.1 ISSfl4 ORF3 VFG0634 Protein 7e-85 67
SF0374 NP_706323.1 ISSfl4 ORF3 VFG1700 Protein 2e-80 66