Gene Information

Name : SF3017a (SF3017a)
Accession : YP_008439281.1
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Unknown
Product : glycolate oxidase FAD binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3113474 - 3114526 bp
Length : 1053 bp
Strand : -
Note : -

DNA sequence :
ATGCTACGCGAGTGTGATTACAGTCAGGCGCTGCTGGAGCAGGTGAATCAGGCAATTAGCGATAAAACGCCGCTGGTGAT
TCAGGGCAGCAATAGCAAAGCCTTTTTAGGTCGCCCAGTCACCGGGCAAACGCTGGATGTGCGTTGTCATCGCGGCATTG
TTAATTACGACCCGACCGAGCTGGTGATAACCGCTCGTGCCGGAACGCCGCTGGTGGCGATTGAAGCGGCGCTGGAGAGC
GCCGGGCAAATGCTTCCCTGCGAGCCGCCGCATTATGGTGAAGAAGCCACCTGGGGCGGGATGGTCGCCTGCGGGCTGGC
GGGGCCGCGTCGCCCGTGGAGCGGTTCGGTCCGCGATTTTGTCCTCGGCACGCGCATCATTACCGGCACTGGAAAACATC
TGCGTTTTGGTGGCGAAGTGATGAAAAACGTTGCCGGATACGATCTCTCACGGTTAATGGCCGGAAGCTACGGTTGTCTT
GGCGTGCTCACTGAAATCTCAATGAAAGTGTTACCGCGACCGCGTGCCTCTCTGAGCCTGCGTCGGGAAATCAGCCTGCA
AGAAGCCATGAGTGAAATCGCCGAGTGGCAACTCCAGCCATTACCCATTAGTGGCTTATGTTACTTCGACAATGCGTTGT
GGATCCGCCTTGAGGGCGGCGAAGGATCGGTAAAAGCAGCGCGTGAACTGCTGGGTGGCGAAGAGGTTGTGGGTCAGTTC
TGGCAGCAATTGCGTGAACAACAACTGCCGTTCTTCTCGTTACCAGGTACCTTATGGCGCATTTCATTACCCAGCGATGC
GCCGATGATGGATTTACCCGGCGAGCAACTGATCGACTGGGGCGGGGCGTTACGCTGGCTGAAATCGACAGCCGATGACA
ATCAAATCCATCGCATCGCCCGCAACGCTGGCGGTCATGCGACCCGCTTTAGTGCCGGAGATGGTGGCTTTGCCCCGCTA
TCGGCTCCTTTATTCCGCTATCACCAGCAGCTTAAACAGCAGCTCGACCCTTGCGGCGTGTTTAACCCCGGTCGCATGTA
CGCGGAACTTTGA

Protein sequence :
MLRECDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVTGQTLDVRCHRGIVNYDPTELVITARAGTPLVAIEAALES
AGQMLPCEPPHYGEEATWGGMVACGLAGPRRPWSGSVRDFVLGTRIITGTGKHLRFGGEVMKNVAGYDLSRLMAGSYGCL
GVLTEISMKVLPRPRASLSLRREISLQEAMSEIAEWQLQPLPISGLCYFDNALWIRLEGGEGSVKAARELLGGEEVVGQF
WQQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQLIDWGGALRWLKSTADDNQIHRIARNAGGHATRFSAGDGGFAPL
SAPLFRYHQQLKQQLDPCGVFNPGRMYAEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 3e-156 99