Gene Information

Name : yeeU (SF2998)
Accession : NP_708772.1
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Virulence
Product : structural protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3096689 - 3097066 bp
Length : 378 bp
Strand : +
Note : -

DNA sequence :
GTGTCAGACACACTCCCCGGGACAACGCCTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGAC
GCCCTGTTTCGGGGCCCGACTGGTACAGGAGGGTAACCGCCTGCATTACCTTGCAGACCGCGCCGGTATCAGAGGCAGGT
TCAGCGACGTAGATGCGTACCACCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACTGGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACACTGTATGCGAAAGGGCTGACCTGCGAAGCCGACACCCTCGGCTCCTG
TGGTTACGTTTATCTGGCTGTTTATCCGACACCGGCAGCGCCCGCAACCACCGTATAA

Protein sequence :
MSDTLPGTTPPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGRFSDVDAYHLDQAFPLLMKQLELMLTGG
ELNPRHQHTVTLYAKGLTCEADTLGSCGYVYLAVYPTPAAPATTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 1e-47 100
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 1e-47 100
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 2e-47 99
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 3e-45 96
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-45 96
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-46 96
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-46 96
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 3e-44 95
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 7e-45 95
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 6e-45 94
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 5e-44 93
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 9e-43 92
Z1220 NP_286755.1 structural protein Not tested TAI Protein 4e-43 92
Z1658 NP_287161.1 structural protein Not tested TAI Protein 4e-43 92
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 1e-42 89
unnamed AAL08477.1 unknown Not tested SRL Protein 2e-43 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yeeU NP_708772.1 structural protein VFG0662 Protein 3e-48 100
yeeU NP_708772.1 structural protein VFG1619 Protein 1e-45 96
yeeU NP_708772.1 structural protein VFG1681 Protein 4e-43 92
yeeU NP_708772.1 structural protein VFG1068 Protein 1e-43 89